Publications

  • KSHV attachment and entry are dependent on V3 integrin localized to specific cell surface microdomains and do not correlate with the presence of heparan sulfate. http://authors.elsevier.com/a/1PPsQ9j6wD35N
    Virology , 2014 July 24 : 464-465118-133
  • Zerr DM, Qin X, Oron AP, Adler AL, Wolter DJ, Berry JE, Hoffman L, Weissman SJ
    Pediatric Infection and Intestinal Carriage Due to Extended-Spectrum-Cephalosporin-Resistant Enterobacteriaceae.
    Antimicrobial agents and chemotherapy , 2014 July : 58(7)3997-4004
  • Beck IA, Deng W, Payant R, Hall R, Bumgarner RE, Mullins JI, Frenkel LM
    Validation of an oligonucleotide ligation assay for quantification of human immunodeficiency virus type 1 drug-resistant mutants by use of massively parallel sequencing.
    Journal of clinical microbiology , 2014 July : 52(7)2320-7
  • Wagner TA, McLaughlin S, Garg K, Cheung CY, Larsen BB, Styrchak S, Huang HC, Edlefsen PT, Mullins JI, Frenkel LM
    Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection.
    Science (New York, N.Y.) , 2014 July
  • Kidzeru EB, Hesseling AC, Passmore JA, Myer L, Gamieldien H, Tchakoute CT, Gray CM, Sodora DL, Jaspan HB
    In-utero exposure to maternal HIV infection alters T-cell immune responses to vaccination in HIV-uninfected infants.
    AIDS (London, England) , 2014 June 19 : 28(10)1421-30
  • Kronman MP, Zerr DM, Qin X, Englund J, Cornell C, Sanders JE, Myers J, Rayar J, Berry JE, Adler AL, Weissman SJ
    Intestinal decontamination of multidrug-resistant Klebsiella pneumoniae after recurrent infections in an immunocompromised host.
    Diagnostic microbiology and infectious disease , 2014 June
  • Mitchell C, Roemer E, Nkwopara E, Robbins B, Cory T, Rue T, Fletcher CV, Frenkel L
    Correlation between Plasma, Intracellular, and Cervical Tissue Levels of Raltegravir at Steady-State Dosing in Healthy Women.
    Antimicrobial agents and chemotherapy , 2014 June : 58(6)3360-3365
  • Mayer-Hamblett N, Rosenfeld M, Gibson RL, Ramsey BW, Kulasekara HD, Retsch-Bogart GZ, Morgan W, Wolter DJ, Pope CE, Houston LS, Kulasekara BR, Khan U, Burns JL, Miller SI, Hoffman LR
    Pseudomonas aeruginosa in vitro Phenotypes Distinguish Cystic Fibrosis Infection Stages and Outcomes.
    American journal of respiratory and critical care medicine , 2014 June
  • Rametse CL, Olivier AJ, Masson L, Barnabas S, McKinnon LR, Ngcapu S, Liebenberg LJ, Jaumdally SZ, Gray CM, Jaspan HB, Passmore JA
    Role of semen in altering the balance between inflammation and tolerance in the female genital tract: does it contribute to HIV risk?
    Viral immunology , 2014 June : 27(5)200-6
  • Stekler JD, McKernan J, Milne R, Tapia KA, Mykhalchenko K, Holte S, Maenza J, Stevens CE, Buskin SE, Mullins JI, Frenkel LM, Collier AC
    Lack of resistance to integrase inhibitors among antiretroviral-naive subjects with primary HIV-1 infection, 2007-2013.
    Antiviral therapy , 2014 May
  • Tullis DE, Burns JL, Retsch-Bogart GZ, Bresnik M, Henig NR, Lewis SA, Lipuma JJ
    Inhaled aztreonam for chronic Burkholderia infection in cystic fibrosis: A placebo-controlled trial.
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2014 May : 13(3)296-305
  • Little ML, Qin X, Zerr DM, Weissman SJ
    Molecular epidemiology of colonizing and disease-causing Klebsiella pneumoniae in paediatric patients.
    Journal of medical microbiology , 2014 Apr, : 63(Pt 4)610-6
  • Drekonja DM, Beekmann SE, Elliott S, Mukundan D, Polenakovik H, Rosenthal ME, Tamma PD, Polgreen PM, Weissman SJ
    Challenges in the management of infections due to carbapenem-resistant Enterobacteriaceae.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2014 Apr, : 35(4)437-9
  • Sick AC, Tschudin-Sutter S, Turnbull AE, Weissman SJ, Tamma PD
    Empiric Combination Therapy for Gram-Negative Bacteremia.
    Pediatrics , 2014 Apr,
  • Mitchell C, Dross S, Beck IA, Micek MA, Frenkel LM
    Low Concentrations of HIV-1 DNA at Birth Delays Diagnosis, Complicating Identification of Infants for Antiretroviral Therapy to Potentially Prevent the Establishment of Viral Reservoirs.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2014 Apr, : 58(8)1190-3
  • Newland JG, Gerber JS, Weissman SJ, Shah SS, Turgeon C, Hedican EB, Thurm C, Hall M, Courter J, Brogan TV, Maples H, Lee BR, Hersh AL
    Prevalence and characteristics of antimicrobial stewardship programs at freestanding children's hospitals in the United States.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2014 Mar. : 35(3)265-71
  • Micek MA, Dross S, Blanco AJ, Beck IA, Matunha L, Seidel K, Montoya P, Matediana E, Gantt S, Gloyd S, Frenkel L
    Transmission of Nevirapine-Resistant HIV Type 1 via Breast Milk to Infants After Single-Dose Nevirapine in Beira, Mozambique.
    The Journal of infectious diseases , 2014 Mar.
  • Vanderhoeven JP, Bierle CJ, Kapur RP, McAdams RM, Beyer RP, Bammler TK, Farin FM, Bansal A, Spencer M, Deng M, Gravett MG, Rubens CE, Rajagopal L, Adams Waldorf KM
    Group B streptococcal infection of the choriodecidua induces dysfunction of the cytokeratin network in amniotic epithelium: a pathway to membrane weakening.
    PLoS pathogens , 2014 Mar. : 10(3)e1003920
  • Garrigues HJ, Rubinchikova YE, Rose TM
    KSHV cell attachment sites revealed by ultra sensitive tyramide signal amplification (TSA) localize to membrane microdomains that are up-regulated on mitotic cells.
    Virology , 2014 Mar. : 452-45375-85
  • Pollack AH, Kronman MP, Zhou C, Zerr DM
    Automated Screening of Hospitalized Children for Influenza Vaccination.
    Journal of the Pediatric Infectious Diseases Society , 2014 Mar. : 3(1)7-14
  • Ross RK, Hersh AL, Kronman MP, Newland JG, Metjian TA, Localio AR, Zaoutis TE, Gerber JS
    Impact of infectious diseases society of america/pediatric infectious diseases society guidelines on treatment of community-acquired pneumonia in hospitalized children.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2014 Mar. : 58(6)834-8
  • Nachman S, Zheng N, Acosta EP, Teppler H, Homony B, Graham B, Fenton T, Xu X, Wenning L, Spector SA, Frenkel LM, Alvero C, Worrell C, Handelsman E, Wiznia A, International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT) P1066 Study Team
    Pharmacokinetics, safety, and 48-week efficacy of oral raltegravir in HIV-1-infected children aged 2 through 18 years.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2014 Feb. : 58(3)413-22
  • DeMaster LK, Rose TM
    A critical Sp1 element in the rhesus rhadinovirus (RRV) Rta promoter confers high-level activity that correlates with cellular permissivity for viral replication.
    Virology , 2014 Jan. 5 : 448196-209
  • Kantor R, Bettendorf D, Bosch RJ, Mann M, Katzenstein D, Cu-Uvin S, D'Aquila R, Frenkel L, Fiscus S, Coombs R, ACTG A5077 Study Team
    HIV-1 RNA levels and antiretroviral drug resistance in blood and non-blood compartments from HIV-1-infected men and women enrolled in AIDS clinical trials group study A5077.
    PloS one , 2014 : 9(4)e93537
  • Cambier CJ, Takaki KK, Larson RP, Hernandez RE, Tobin DM, Urdahl KB, Cosma CL, Ramakrishnan L
    Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids.
    Nature , 2014 Jan. : 505(7482)218-22
  • Waghmare A, Campbell AP, Xie H, Seo S, Kuypers J, Leisenring W, Jerome KR, Englund JA, Boeckh M
    Respiratory syncytial virus lower respiratory disease in hematopoietic cell transplant recipients: viral RNA detection in blood, antiviral treatment, and clinical outcomes.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2013 Dec. : 57(12)1731-41
  • Bruce AG, Ryan JT, Thomas MJ, Peng X, Grundhoff A, Tsai CC, Rose TM
    Next-Generation Sequence Analysis of the Genome of RFHVMn, the Macaque Homolog of Kaposi's Sarcoma (KS)-Associated Herpesvirus, from a KS-Like Tumor of a Pig-Tailed Macaque.
    Journal of virology , 2013 Dec. : 87(24)13676-93
  • De Soyza A, Hall AJ, Mahenthiralingam E, Drevinek P, Kaca W, Drulis-Kawa Z, Stoitsova SR, Toth V, Coenye T, Zlosnik JE, Burns JL, Sá-Correia I, De Vos D, Pirnay JP, J Kidd T, Reid D, Manos J, Klockgether J, Wiehlmann L, Tümmler B, McClean S, Winstanley C, EU FP7 funded COST Action BM1003 Cell surface virulence determinants of cystic fibrosis pathogens
    Developing an international Pseudomonas aeruginosa reference panel.
    MicrobiologyOpen , 2013 Dec. : 2(6)1010-23
  • Gerber JS, Kronman MP, Ross RK, Hersh AL, Newland JG, Metjian TA, Zaoutis TE
    Identifying targets for antimicrobial stewardship in children's hospitals.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2013 Dec. : 34(12)1252-8
  • Payne DC, Baggs J, Zerr DM, Klein NP, Yih K, Glanz J, Curns AT, Weintraub E, Parashar UD
    Protective Association Between Rotavirus Vaccination and Childhood Seizures in the Year Following Vaccination in US Children.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2013 Nov. 20
  • Englund JA, Karron RA, Cunningham CK, Larussa P, Melvin A, Yogev R, Handelsman E, Siberry GK, Thumar B, Schappell E, Bull CV, Chu HY, Schaap-Nutt A, Buchholz U, Collins PL, Schmidt AC, International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT) P1096 Study Group
    Safety and infectivity of two doses of live-attenuated recombinant cold-passaged human parainfluenza type 3 virus vaccine rHPIV3cp45 in HPIV3-seronegative young children.
    Vaccine , 2013 Nov. 19 : 31(48)5706-12
  • Larsen BB, Chen L, Maust BS, Kim M, Zhao H, Deng W, Westfall D, Beck I, Frenkel LM, Mullins JI
    Improved Detection of Rare HIV-1 Variants using 454 Pyrosequencing.
    PloS one , 2013 Oct. : 8(10)e76502
  • Dury AY, El Fatimy R, Tremblay S, Rose TM, Côté J, De Koninck P, Khandjian EW
    Nuclear Fragile X Mental Retardation Protein Is localized to Cajal Bodies.
    PLoS genetics , 2013 Oct. : 9(10)e1003890
  • Burns JL, Rolain JM
    Culture-based diagnostic microbiology in cystic fibrosis: Can we simplify the complexity?
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2013 Oct.
  • Tchesnokova V, Billig M, Chattopadhyay S, Linardopoulou E, Aprikian P, Roberts PL, Skrivankova V, Johnston B, Gileva A, Igusheva I, Toland A, Riddell K, Rogers P, Qin X, Butler-Wu S, Cookson BT, Fang FC, Kahl B, Price LB, Weissman SJ, Limaye A, Scholes D, Johnson JR, Sokurenko EV
    Predictive diagnostics for Escherichia coli infections based on the clonal association of antimicrobial resistance and clinical outcome.
    Journal of clinical microbiology , 2013 Sept. : 51(9)2991-9
  • Ellis GM, Vlaskin TA, Koth A, Vaz LE, Dross SE, Beck IA, Frenkel LM
    Simultaneous and sensitive detection of human immunodeficiency virus type 1 (HIV) drug resistant genotypes by multiplex oligonucleotide ligation assay.
    Journal of virological methods , 2013 Sept. : 192(1-2)39-43
  • Anstead M, Saiman L, Mayer-Hamblett N, Lands LC, Kloster M, Goss CH, Rose L, Burns JL, Marshall B, Ratjen F
    Pulmonary exacerbations in CF patients with early lung disease.
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2013 Sept.
  • Chu HY, Kuypers J, Renaud C, Wald A, Martin E, Fairchok M, Magaret A, Sarancino M, Englund JA
    Molecular epidemiology of respiratory syncytial virus transmission in childcare.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2013 Aug. : 57(4)343-50
  • Renaud C, Xie H, Seo S, Kuypers J, Cent A, Corey L, Leisenring W, Boeckh M, Englund JA
    Mortality rates of human metapneumovirus and respiratory syncytial virus lower respiratory tract infections in hematopoietic cell transplantation recipients.
    Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation , 2013 Aug. : 19(8)1220-6
  • Wolter DJ, Emerson JC, McNamara S, Buccat AM, Qin X, Cochrane E, Houston LS, Rogers GB, Marsh P, Prehar K, Pope CE, Blackledge M, Déziel E, Bruce KD, Ramsey BW, Gibson RL, Burns JL, Hoffman LR
    Staphylococcus aureus small-colony variants are independently associated with worse lung disease in children with cystic fibrosis.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2013 Aug. : 57(3)384-91
  • Patras KA, Wang NY, Fletcher EM, Cavaco CK, Jimenez A, Garg M, Fierer J, Sheen TR, Rajagopal L, Doran KS
    Group B Streptococcus CovR regulation modulates host immune signalling pathways to promote vaginal colonization.
    Cellular microbiology , 2013 July : 15(7)1154-67
  • Wood LF, Chahroudi A, Chen HL, Jaspan HB, Sodora DL
    The oral mucosa immune environment and oral transmission of HIV/SIV.
    Immunological reviews , 2013 July : 254(1)34-53
  • Chattopadhyay S, Taub F, Paul S, Weissman SJ, Sokurenko EV
    Microbial variome database: point mutations, adaptive or not, in bacterial core genomes.
    Molecular biology and evolution , 2013 June : 30(6)1465-70
  • Whidbey C, Harrell MI, Burnside K, Ngo L, Becraft AK, Iyer LM, Aravind L, Hitti J, Waldorf KM, Rajagopal L
    A hemolytic pigment of Group B Streptococcus allows bacterial penetration of human placenta.
    The Journal of experimental medicine , 2013 June : 210(6)1265-81
  • Gutierrez KD, Morris VA, Wu D, Barcy S, Lagunoff M
    Ets-1 is required for the activation of VEGFR3 during latent Kaposi's sarcoma-associated herpesvirus infection of endothelial cells.
    Journal of virology , 2013 June : 87(12)6758-6768
  • Weissman SJ, Adler A, Qin X, Zerr DM
    Emergence of extended-spectrum -lactam resistance among Escherichia coli at a US academic children's hospital is clonal at the sequence type level for CTX-M-15, but not for CMY-2.
    International journal of antimicrobial agents , 2013 May : 41(5)414-20
  • Weissman SJ, Adler A, Qin X, Zerr DM
    Emergence of extended-spectrum -lactam resistance among Escherichia coli at a US academic children's hospital is clonal at the sequence type level for CTX-M-15, but not for CMY-2.
    International journal of antimicrobial agents , 2013 May : 41(5)414-20
  • McLaughlin S, Swenson LC, Hu S, Hughes P, Harrigan PR, Coombs RW, Frenkel LM
    Development of a novel codon-specific polymerase chain reaction for the detection of CXCR4-utilizing HIV type 1 subtype B.
    AIDS research and human retroviruses , 2013 May : 29(5)814-25
  • Lion KC, Mangione-Smith R, Martyn M, Hencz P, Fernandez J, Tamura G
    Comprehension on family-centered rounds for limited English proficient families.
    Academic pediatrics , 2013 May : 13(3)236-42
  • Seo S, Campbell AP, Xie H, Chien JW, Leisenring WM, Englund JA, Boeckh M
    Outcome of respiratory syncytial virus lower respiratory tract disease in hematopoietic cell transplant recipients receiving aerosolized ribavirin: significance of stem cell source and oxygen requirement.
    Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation , 2013 Apr, : 19(4)589-96
  • Bull ME, Heath LM, McKernan-Mullin JL, Kraft KM, Acevedo L, Hitti JE, Cohn SE, Tapia KA, Holte SE, Dragavon JA, Coombs RW, Mullins JI, Frenkel LM
    Human immunodeficiency viruses appear compartmentalized to the female genital tract in cross-sectional analyses but genital lineages do not persist over time.
    The Journal of infectious diseases , 2013 Apr, : 207(8)1206-15
  • Ruddy J, Emerson J, Moss R, Genatossio A, McNamara S, Burns JL, Anderson G, Rosenfeld M
    Sputum tobramycin concentrations in cystic fibrosis patients with repeated administration of inhaled tobramycin.
    Journal of aerosol medicine and pulmonary drug delivery , 2013 Apr, : 26(2)69-75
  • Liu ZH, Xu Y, Duo LB, Liu Y, Xu ZZ, Burns JL, Liu GR, Yang BF, Liu SL
    Pseudomonas aeruginosa isolates of distinct sub-genotypes exhibit similar potential of antimicrobial resistance by drugs exposure.
    Antonie van Leeuwenhoek , 2013 Apr, : 103(4)797-807
  • Bull ME, Heath LM, McKernan-Mullin JL, Kraft KM, Acevedo L, Hitti JE, Cohn SE, Tapia KA, Holte SE, Dragavon JA, Coombs RW, Mullins JI, Frenkel LM
    Human immunodeficiency viruses appear compartmentalized to the female genital tract in cross-sectional analyses but genital lineages do not persist over time.
    The Journal of infectious diseases , 2013 Apr, : 207(8)1206-15
  • Milstone AM, Elward A, Song X, Zerr DM, Orscheln R, Speck K, Obeng D, Reich NG, Coffin SE, Perl TM, Pediatric SCRUB Trial Study Group
    Daily chlorhexidine bathing to reduce bacteraemia in critically ill children: a multicentre, cluster-randomised, crossover trial.
    Lancet , 2013 Mar. 30 : 381(9872)1099-106
  • Martin ET, Fairchok MP, Stednick ZJ, Kuypers J, Englund JA
    Epidemiology of multiple respiratory viruses in childcare attendees.
    The Journal of infectious diseases , 2013 Mar. 15 : 207(6)982-9
  • Kisiela DI, Chattopadhyay S, Tchesnokova V, Paul S, Weissman SJ, Medenica I, Clegg S, Sokurenko EV
    Evolutionary analysis points to divergent physiological roles of type 1 fimbriae in Salmonella and Escherichia coli.
    mBio , 2013 Mar. : 4(2)
  • Johnson JR, Tchesnokova V, Johnston B, Clabots C, Roberts PL, Billig M, Riddell K, Rogers P, Qin X, Butler-Wu S, Price LB, Aziz M, Nicolas-Chanoine MH, Debroy C, Robicsek A, Hansen G, Urban C, Platell J, Trott DJ, Zhanel G, Weissman SJ, Cookson BT, Fang FC, Limaye AP, Scholes D, Chattopadhyay S, Hooper DC, Sokurenko EV
    Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli.
    The Journal of infectious diseases , 2013 Mar. : 207(6)919-28
  • Kimberlin DW, Acosta EP, Prichard MN, Sánchez PJ, Ampofo K, Lang D, Ashouri N, Vanchiere JA, Abzug MJ, Abughali N, Caserta MT, Englund JA, Sood SK, Spigarelli MG, Bradley JS, Lew J, Michaels MG, Wan W, Cloud G, Jester P, Lakeman FD, Whitley RJ, National Institute of Allergy and Infectious Diseases Collaborative Antiviral Study Group
    Oseltamivir pharmacokinetics, dosing, and resistance among children aged <2 years with influenza.
    The Journal of infectious diseases , 2013 Mar. 1 : 207(5)709-20
  • Ton Q, Frenkel L
    HIV drug resistance in mothers and infants following use of antiretrovirals to prevent mother-to-child transmission.
    Current HIV research , 2013 Mar. : 11(2)126-36
  • Ryan JT, Rose TM
    Development of whole-virus multiplex luminex-based serological assays for diagnosis of infections with kaposi's sarcoma-associated herpesvirus/human herpesvirus 8 homologs in macaques.
    Clinical and vaccine immunology : CVI , 2013 Mar. : 20(3)409-19
  • Wagner TA, McKernan JL, Tobin NH, Tapia KA, Mullins JI, Frenkel LM
    An increasing proportion of monotypic HIV-1 DNA sequences during antiretroviral treatment suggests proliferation of HIV-infected cells.
    Journal of virology , 2013 Feb. : 87(3)1770-8
  • Mitchell C, Balkus JE, McKernan-Mullin J, Cohn SE, Luque AE, Mwachari C, Cohen CR, Coombs R, Frenkel LM, Hitti J
    Associations between genital tract infections, genital tract inflammation, and cervical cytobrush HIV-1 DNA in US versus Kenyan women.
    Journal of acquired immune deficiency syndromes (1999) , 2013 Feb. : 62(2)143-8
  • Wagner TA, McKernan JL, Tobin NH, Tapia KA, Mullins JI, Frenkel LM
    An increasing proportion of monotypic HIV-1 DNA sequences during antiretroviral treatment suggests proliferation of HIV-infected cells.
    Journal of virology , 2013 Feb. : 87(3)1770-8
  • Tamma PD, Newland JG, Pannaraj PS, Metjian TA, Banerjee R, Gerber JS, Weissman SJ, Beekmann SE, Polgreen PM, Hersh AL
    The use of intravenous colistin among children in the United States: results from a multicenter, case series.
    The Pediatric infectious disease journal , 2013 Jan. : 32(1)17-22
  • Human metapneumovirus and respiratory syncytial virus lower respiratory tract infections in hematopoietic stem cell transplant recipients have high mortality rates.
    BBMT , 2013 : 191220-6
  • Campbell AP, Kuypers J, Englund JA, Guthrie KA, Corey L, Boeckh M
    Self-collection of foam nasal swabs for respiratory virus detection by PCR among immunocompetent subjects and hematopoietic cell transplant recipients.
    Journal of clinical microbiology , 2013 Jan. : 51(1)324-7
  • Seo S, Englund JA, Nguyen JT, Pukrittayakamee S, Lindegardh N, Tarning J, Tambyah PA, Renaud C, Went GT, de Jong MD, Boeckh MJ
    Combination therapy with amantadine, oseltamivir and ribavirin for influenza A infection: safety and pharmacokinetics.
    Antiviral therapy , 2013 : 18(3)377-86
  • Xu M, Qin X, Astion ML, Rutledge JC, Simpson J, Jerome KR, Englund JA, Zerr DM, Migita RT, Rich S, Childs JC, Cent A, Del Beccaro MA
    Implementation of filmarray respiratory viral panel in a core laboratory improves testing turnaround time and patient care.
    American journal of clinical pathology , 2013 Jan. : 139(1)118-23
  • Jacobson A, Bell F, Lejarcegui N, Mitchell C, Frenkel L, Horton H
    Healthy Neonates Possess a CD56-Negative NK Cell Population with Reduced Anti-Viral Activity.
    PloS one , 2013 : 8(6)e67700
  • Wagner TA, Lin CH, Tobin NH, Côté HC, Sloan DD, Jerome KR, Frenkel LM
    Quantification of mitochondrial toxicity in HIV-infected individuals by quantitative PCR compared to flow cytometry.
    Cytometry. Part B, Clinical cytometry , 2013 Jan. : 84(1)55-8
  • Mitchell C, Balkus JE, Fredricks D, Liu C, McKernan-Mullin J, Frenkel LM, Mwachari C, Luque A, Cohn SE, Cohen CR, Coombs R, Hitti J
    Interaction between lactobacilli, bacterial vaginosis-associated bacteria, and HIV Type 1 RNA and DNA Genital shedding in U.S. and Kenyan women.
    AIDS research and human retroviruses , 2013 Jan. : 29(1)13-9
  • Jacobson A, Bell F, Lejarcegui N, Mitchell C, Frenkel L, Horton H
    Healthy Neonates Possess a CD56-Negative NK Cell Population with Reduced Anti-Viral Activity.
    PloS one , 2013 : 8(6)e67700
  • Wagner TA, Lin CH, Tobin NH, Côté HC, Sloan DD, Jerome KR, Frenkel LM
    Quantification of mitochondrial toxicity in HIV-infected individuals by quantitative PCR compared to flow cytometry.
    Cytometry. Part B, Clinical cytometry , 2013 Jan. : 84(1)55-8
  • Choi SM, Xie H, Campbell AP, Kuypers J, Leisenring W, Boudreault AA, Englund JA, Corey L, Boeckh M
    Influenza viral RNA detection in blood as a marker to predict disease severity in hematopoietic cell transplant recipients.
    The Journal of infectious diseases , 2012 Dec. 15 : 206(12)1872-7
  • Burnside K, Lembo A, Harrell MI, Klein JA, Lopez-Guisa J, Siegesmund AM, Torgerson TR, Oukka M, Molina DM, Rajagopal L
    Vaccination with a UV-irradiated genetically attenuated mutant of Staphylococcus aureus provides protection against subsequent systemic infection.
    The Journal of infectious diseases , 2012 Dec. : 206(11)1734-44
  • Kronman MP, Gerber JS, Prasad PA, Adler AL, Bass JA, Newland JG, Shah KM, Zerr DM, Feng R, Coffin SE, Zaoutis TE
    Variation in Antibiotic Use for Children Hospitalized With Inflammatory Bowel Disease Exacerbation: A Multicenter Validation Study.
    Journal of the Pediatric Infectious Diseases Society , 2012 Dec. : 1(4)306-313
  • Zerr DM, Boeckh M, Delaney C, Martin PJ, Xie H, Adler AL, Huang ML, Corey L, Leisenring WM
    HHV-6 reactivation and associated sequelae after hematopoietic cell transplantation.
    Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation , 2012 Nov. : 18(11)1700-8
  • Qin X, Zerr DM, McNutt MA, Berry JE, Burns JL, Kapur RP
    Pseudomonas aeruginosa syntrophy in chronically colonized airways of cystic fibrosis patients.
    Antimicrobial agents and chemotherapy , 2012 Nov. : 56(11)5971-81
  • Kuypers J, Campbell AP, Guthrie KA, Wright NL, Englund JA, Corey L, Boeckh M
    WU and KI polyomaviruses in respiratory samples from allogeneic hematopoietic cell transplant recipients.
    Emerging infectious diseases , 2012 Oct. : 18(10)1580-8
  • Rowe SM, Borowitz DS, Burns JL, Clancy JP, Donaldson SH, Retsch-Bogart G, Sagel SD, Ramsey BW
    Progress in cystic fibrosis and the CF Therapeutics Development Network.
    Thorax , 2012 Oct. : 67(10)882-90
  • Kronman MP, Zaoutis TE, Haynes K, Feng R, Coffin SE
    Antibiotic exposure and IBD development among children: a population-based cohort study.
    Pediatrics , 2012 Oct. : 130(4)e794-803
  • Gantt S, Payant R, Carlsson J, Micek MA, Blanco AJ, Beck IA, Matunha L, Montoya P, Matediana E, Gloyd S, Frenkel LM
    Nevirapine-Resistant HIV-1 DNA in Breast Milk After Single-Dose Nevirapine With or Without Zidovudine for Prevention of Mother-to-Child Transmission.
    Journal of the Pediatric Infectious Diseases Society , 2012 Sept. : 1(3)244-249
  • Rosenfeld M, Bernardo-Ocampo C, Emerson J, Genatossio A, Burns J, Gibson R
    Prevalence of cystic fibrosis pathogens in the oropharynx of healthy children and implications for cystic fibrosis care.
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2012 Sept. : 11(5)456-7
  • Human herpesvirus 6 (HHV-6) disease in the setting of transplantation.
    Current opinion in infectious diseases , 2012 Aug. : 25(4)438-44
  • Newland JG, Banerjee R, Gerber JS, Hersh AL, Steinke L, Weissman SJ
    Antimicrobial stewardship in pediatric care: strategies and future directions.
    Pharmacotherapy , 2012 Aug. : 32(8)735-43
  • Beck IA, Jang M, McKernan-Mullin J, Bull M, Wagner T, Huang S, Song LY, Nachman S, Krogstad P, Eshleman SH, Wiznia A, Frenkel LM
    Monitoring of HIV type 1 DNA load and drug resistance in peripheral blood mononuclear cells during suppressive antiretroviral therapy does not predict virologic failure.
    AIDS research and human retroviruses , 2012 Aug. : 28(8)780-8
  • Baeten JM, Donnell D, Ndase P, Mugo NR, Campbell JD, Wangisi J, Tappero JW, Bukusi EA, Cohen CR, Katabira E, Ronald A, Tumwesigye E, Were E, Fife KH, Kiarie J, Farquhar C, John-Stewart G, Kakia A, Odoyo J, Mucunguzi A, Nakku-Joloba E, Twesigye R, Ngure K, Apaka C, Tamooh H, Gabona F, Mujugira A, Panteleeff D, Thomas KK, Kidoguchi L, Krows M, Revall J, Morrison S, Haugen H, Emmanuel-Ogier M, Ondrejcek L, Coombs RW, Frenkel L, Hendrix C, Bumpus NN, Bangsberg D, Haberer JE, Stevens WS, Lingappa JR, Celum C, Partners PrEP Study Team
    Antiretroviral prophylaxis for HIV prevention in heterosexual men and women.
    The New England journal of medicine , 2012 Aug. : 367(5)399-410
  • Beck IA, Jang M, McKernan-Mullin J, Bull M, Wagner T, Huang S, Song LY, Nachman S, Krogstad P, Eshleman SH, Wiznia A, Frenkel LM
    Monitoring of HIV type 1 DNA load and drug resistance in peripheral blood mononuclear cells during suppressive antiretroviral therapy does not predict virologic failure.
    AIDS research and human retroviruses , 2012 Aug. : 28(8)780-8
  • Beck IA, Jang M, McKernan-Mullin J, Bull M, Wagner T, Huang S, Song LY, Nachman S, Krogstad P, Eshleman SH, Wiznia A, Frenkel LM
    Monitoring of HIV type 1 DNA load and drug resistance in peripheral blood mononuclear cells during suppressive antiretroviral therapy does not predict virologic failure.
    AIDS research and human retroviruses , 2012 Aug. : 28(8)780-8
  • Saiman L, Mayer-Hamblett N, Anstead M, Lands LC, Kloster M, Goss CH, Rose LM, Burns JL, Marshall BC, Ratjen F, AZ0004 Macrolide Study Team
    Open-label, follow-on study of azithromycin in pediatric patients with CF uninfected with Pseudomonas aeruginosa.
    Pediatric pulmonology , 2012 July : 47(7)641-8
  • Micek MA, Blanco AJ, Carlsson J, Beck IA, Dross S, Matunha L, Seidel K, Montoya P, Gantt S, Matediana E, Jamisse L, Gloyd S, Frenkel LM
    Effects of short-course zidovudine on the selection of nevirapine-resistant HIV-1 in women taking single-dose nevirapine.
    The Journal of infectious diseases , 2012 June : 205(12)1811-5
  • Johnson JR, Urban C, Weissman SJ, Jorgensen JH, Lewis JS 2nd, Hansen G, Edelstein PH, Robicsek A, Cleary T, Adachi J, Paterson D, Quinn J, Hanson ND, Johnston BD, Clabots C, Kuskowski MA, AMERECUS Investigators
    Molecular epidemiological analysis of Escherichia coli sequence type ST131 (O25:H4) and blaCTX-M-15 among extended-spectrum--lactamase-producing E. coli from the United States, 2000 to 2009.
    Antimicrobial agents and chemotherapy , 2012 May : 56(5)2364-70
  • Burns JL, Emerson J, Kuypers J, Campbell AP, Gibson RL, McNamara S, Worrell K, Englund JA
    Respiratory viruses in children with cystic fibrosis: viral detection and clinical findings.
    Influenza and other respiratory viruses , 2012 May : 6(3)218-23
  • Burns JL, Emerson J, Kuypers J, Campbell AP, Gibson RL, McNamara S, Worrell K, Englund JA
    Respiratory viruses in children with cystic fibrosis: viral detection and clinical findings.
    Influenza and other respiratory viruses , 2012 May : 6(3)218-23
  • Lundgren IS, Zhou C, Malone FR, McAfee NG, Gantt S, Zerr DM
    Central venous catheter repair is associated with an increased risk of bacteremia and central line-associated bloodstream infection in pediatric patients.
    The Pediatric infectious disease journal , 2012 Apr, : 31(4)337-40
  • Johnson JR, Nicolas-Chanoine MH, DebRoy C, Castanheira M, Robicsek A, Hansen G, Weissman S, Urban C, Platell J, Trott D, Zhanel G, Clabots C, Johnston BD, Kuskowski MA, MASTER Investigators
    Comparison of Escherichia coli ST131 pulsotypes, by epidemiologic traits, 1967-2009.
    Emerging infectious diseases , 2012 Apr, : 18(4)598-607
  • Wagner TA, Frenkel LM
    Yet another reason to treat HIV infection.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2012 Apr, : 54(7)1010-2
  • Soria J, Bull M, Mitchell C, La Rosa A, Dross S, Kraft K, Coombs R, Ticona E, Frenkel L
    Transmitted HIV resistance to first-line antiretroviral therapy in Lima, Peru.
    AIDS research and human retroviruses , 2012 Apr, : 28(4)333-8
  • Burnside K, Rajagopal L
    Regulation of prokaryotic gene expression by eukaryotic-like enzymes.
    Current opinion in microbiology , 2012 Apr, : 15(2)125-31
  • Wagner TA, Frenkel LM
    Yet Another Reason to Treat HIV Infection.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2012 Apr, : 54(7)1010-2
  • Soria J, Bull M, Mitchell C, La Rosa A, Dross S, Kraft K, Coombs R, Ticona E, Frenkel L
    Transmitted HIV resistance to first-line antiretroviral therapy in Lima, Peru.
    AIDS research and human retroviruses , 2012 Apr, : 28(4)333-8
  • Weissman SJ, Johnson JR, Tchesnokova V, Billig M, Dykhuizen D, Riddell K, Rogers P, Qin X, Butler-Wu S, Cookson BT, Fang FC, Scholes D, Chattopadhyay S, Sokurenko E
    High-resolution two-locus clonal typing of extraintestinal pathogenic Escherichia coli.
    Applied and environmental microbiology , 2012 Mar. : 78(5)1353-60
  • Cressey TR, Stek A, Capparelli E, Bowonwatanuwong C, Prommas S, Sirivatanapa P, Yuthavisuthi P, Neungton C, Huo Y, Smith E, Best BM, Mirochnick M, IMPAACT P1026s Team
    Efavirenz pharmacokinetics during the third trimester of pregnancy and postpartum.
    Journal of acquired immune deficiency syndromes (1999) , 2012 Mar. : 59(3)245-52
  • Mayer-Hamblett N, Kronmal RA, Gibson RL, Rosenfeld M, Retsch-Bogart G, Treggiari MM, Burns JL, Khan U, Ramsey BW, EPIC Investigators
    Initial Pseudomonas aeruginosa treatment failure is associated with exacerbations in cystic fibrosis.
    Pediatric pulmonology , 2012 Feb. : 47(2)125-34
  • Nglazi MD, Kranzer K, Holele P, Kaplan R, Mark D, Jaspan H, Lawn SD, Wood R, Bekker LG
    Treatment outcomes in HIV-infected adolescents attending a community-based antiretroviral therapy clinic in South Africa.
    BMC infectious diseases , 2012 Jan. 25 : 1221
  • Soma VL, Qin X, Zhou C, Adler A, Berry JE, Zerr DM
    The effects of daily chlorhexidine bathing on cutaneous bacterial isolates: a pilot study.
    Infection and drug resistance , 2012 : 575-8
  • Antibiotic options for treatment of pediatric infections with Enterobacteriaceae producing broad spectrum beta-lactamases
    Anti-Infective Agents , 2012 : 10(2)130-135
  • Little ML, Qin X, Zerr DM, Weissman SJ
    Molecular diversity in mechanisms of carbapenem resistance in paediatric Enterobacteriaceae.
    International journal of antimicrobial agents , 2012 Jan. : 39(1)52-7
  • Martin ET, Kuypers J, Wald A, Englund JA
    Multiple versus single virus respiratory infections: viral load and clinical disease severity in hospitalized children.
    Influenza and other respiratory viruses , 2012 Jan. : 6(1)71-7
  • Renaud C, Englund JA
    Antiviral therapy of respiratory viruses in haematopoietic stem cell transplant recipients.
    Antiviral therapy , 2012 : 17(1 Pt B)175-91
  • Siberry GK, Warshaw MG, Williams PL, Spector SA, Decker MD, Jean-Philippe P, Yogev R, Heckman BE, Manzella A, Roa J, Nachman S, Lujan-Zilbermann J, IMPAACT P1065 Protocol Team
    Safety and immunogenicity of quadrivalent meningococcal conjugate vaccine in 2- to 10-year-old human immunodeficiency virus-infected children.
    The Pediatric infectious disease journal , 2012 Jan. : 31(1)47-52
  • Van Dyke RB, Ngo-Giang-Huong N, Shapiro DE, Frenkel L, Britto P, Roongpisuthipong A, Beck IA, Yuthavisuthi P, Prommas S, Puthanakit T, Achalapong J, Chotivanich N, Rasri W, Cressey TR, Maupin R, Mirochnick M, Jourdain G, IMPAACT P1032 Protocol Team
    A comparison of 3 regimens to prevent nevirapine resistance mutations in HIV-infected pregnant women receiving a single intrapartum dose of nevirapine.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2012 Jan. : 54(2)285-93
  • Bruce AG, Bielefeldt-Ohmann H, Barcy S, Bakke AM, Lewis P, Tsai CC, Murnane RD, Rose TM
    Macaque homologs of EBV and KSHV show uniquely different associations with simian AIDS-related lymphomas.
    PLoS pathogens , 2012 : 8(10)e1002962
  • Bruce AG, Bielefeldt-Ohmann H, Barcy S, Bakke AM, Lewis P, Tsai CC, Murnane RD, Rose TM
    Macaque homologs of EBV and KSHV show uniquely different associations with simian AIDS-related lymphomas.
    PLoS pathogens , 2012 : 8(10)e1002962
  • Burnside K, Lembo A, Harrell MI, Gurney M, Xue L, BinhTran NT, Connelly JE, Jewell KA, Schmidt BZ, de los Reyes M, Tao WA, Doran KS, Rajagopal L
    Serine/threonine phosphatase Stp1 mediates post-transcriptional regulation of hemolysin, autolysis, and virulence of group B Streptococcus.
    The Journal of biological chemistry , 2011 Dec. : 286(51)44197-210
  • Jaspan HB, Myer L, Madhi SA, Violari A, Gibb DM, Stevens WS, Dobbels E, Cotton MF
    Utility of clinical parameters to identify HIV infection in infants below ten weeks of age in South Africa: a prospective cohort study.
    BMC pediatrics , 2011 Nov. 21 : 11104
  • Jaspan HB, Liebenberg L, Hanekom W, Burgers W, Coetzee D, Williamson AL, Little F, Myer L, Coombs RW, Sodora D, Passmore JA
    Immune activation in the female genital tract during HIV infection predicts mucosal CD4 depletion and HIV shedding.
    The Journal of infectious diseases , 2011 Nov. 15 : 204(10)1550-6
  • Munoz F, Englund J
    Infant pertussis: is cocooning the answer?
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2011 Nov. : 53(9)893-6
  • Ellis GM, Huang S, Hitti J, Frenkel LM, for the P1022 Study Team
    Selection of HIV Resistance Associated With Antiretroviral Therapy Initiated Due to Pregnancy and Suspended Postpartum.
    Journal of acquired immune deficiency syndromes (1999) , 2011 Nov. : 241-247
  • Renaud C, Kuypers J, Englund JA
    Emerging oseltamivir resistance in seasonal and pandemic influenza A/H1N1.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2011 Oct. : 52(2)70-8
  • Kimberlin DW, Whitley RJ, Wan W, Powell DA, Storch G, Ahmed A, Palmer A, Sánchez PJ, Jacobs RF, Bradley JS, Robinson JL, Shelton M, Dennehy PH, Leach C, Rathore M, Abughali N, Wright P, Frenkel LM, Brady RC, Van Dyke R, Weiner LB, Guzman-Cottrill J, McCarthy CA, Griffin J, Jester P, Parker M, Lakeman FD, Kuo H, Lee CH, Cloud GA, National Institute of Allergy and Infectious Diseases Collaborative Antiviral Study Group
    Oral acyclovir suppression and neurodevelopment after neonatal herpes.
    The New England journal of medicine , 2011 Oct. : 1284-92
  • Vega C, Chou S, Engel K, Harrell ME, Rajagopal L, Grundner C
    Structure and substrate recognition of the Staphylococcus aureus protein tyrosine phosphatase PtpA.
    Journal of molecular biology , 2011 Oct. : 413(1)24-31
  • Jaspan HB, Mueller AD, Myer L, Bekker LG, Orrell C
    Effect of caregivers' depression and alcohol use on child antiretroviral adherence in South Africa.
    AIDS patient care and STDs , 2011 Oct. : 25(10)595-600
  • Treggiari MM, Retsch-Bogart G, Mayer-Hamblett N, Khan U, Kulich M, Kronmal R, Williams J, Hiatt P, Gibson RL, Spencer T, Orenstein D, Chatfield BA, Froh DK, Burns JL, Rosenfeld M, Ramsey BW, Early Pseudomonas Infection Control (EPIC) Investigators
    Comparative efficacy and safety of 4 randomized regimens to treat early Pseudomonas aeruginosa infection in children with cystic fibrosis.
    Archives of pediatrics & adolescent medicine , 2011 Sept. : 165(9)847-56
  • Burns JL, Emerson J, Kuypers J, Campbell AP, Gibson RL, McNamara S, Worrell K, Englund JA
    Respiratory viruses in children with cystic fibrosis: viral detection and clinical findings.
    Influenza and other respiratory viruses , 2011 Sept.
  • Evolution of Pseudomonas aeruginosa virulence in infected patients revealed in a Dictyostelium discoideum host model
    Clin Microbiol Infect , 2011 Sept. : 1415-20
  • Lipstein EA, Kronman MP, Richmond C, White KN, Shugerman RP, McPhillips HA
    Addressing core competencies through hospital quality improvement activities: attitudes and engagement.
    Journal of graduate medical education , 2011 Sept. : 3(3)315-9
  • Fairchok MP, Martin ET, Kuypers J, Englund JA
    A prospective study of parainfluenza virus type 4 infections in children attending daycare.
    The Pediatric infectious disease journal , 2011 Aug. : 30(8)714-6
  • Boudreault AA, Xie H, Leisenring W, Englund J, Corey L, Boeckh M
    Impact of corticosteroid treatment and antiviral therapy on clinical outcomes in hematopoietic cell transplant patients infected with influenza virus.
    Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation , 2011 July : 17(7)979-86
  • Qin X, Poon B, Kwong J, Niles D, Schmidt BZ, Rajagopal L, Gantt S
    Two paediatric cases of skin and soft-tissue infections due to clindamycin-resistant Staphylococcus aureus carrying a plasmid-encoded vga(A) allelic variant for a putative efflux pump.
    International journal of antimicrobial agents , 2011 July : 38(1)81-3
  • Burnside K, Rajagopal L
    Aspects of eukaryotic-like signaling in Gram-positive cocci: a focus on virulence.
    Future microbiology , 2011 July : 6(7)747-61
  • Green N, Burns JL, Mayer-Hamblett N, Kloster M, Lands LC, Anstead M, Ratjen F, Saiman L
    Lack of association of small-colony-variant Staphylococcus aureus strains with long-term use of azithromycin in patients with cystic fibrosis.
    Journal of clinical microbiology , 2011 July : 49(7)2772-3
  • Jaspan HB, Flisher AJ, Myer L, Mathews C, Middelkoop K, Mark D, Bekker LG
    Sexual health, HIV risk, and retention in an adolescent HIV-prevention trial preparatory cohort.
    The Journal of adolescent health : official publication of the Society for Adolescent Medicine , 2011 July : 49(1)42-6
  • Ortiz JR, Englund JA, Neuzil KM
    Influenza vaccine for pregnant women in resource-constrained countries: a review of the evidence to inform policy decisions.
    Vaccine , 2011 June 15 : 29(27)4439-52
  • Halasa N, Englund JA, Nachman S, Weinberg GA, Huber VC, Allison K, Dubovsky F, Yi T, McCullers JA, Flynn PM
    Safety of live attenuated influenza vaccine in mild to moderately immunocompromised children with cancer.
    Vaccine , 2011 May 31 : 29(24)4110-5
  • Zerr DM, Fann JR, Breiger D, Boeckh M, Adler AL, Xie H, Delaney C, Huang ML, Corey L, Leisenring WM
    HHV-6 reactivation and its effect on delirium and cognitive functioning in hematopoietic cell transplantation recipients.
    Blood , 2011 May 12 : 117(19)5243-9
  • Renaud C, Kuypers J, Ficken E, Cent A, Corey L, Englund JA
    Introduction of a novel parechovirus RT-PCR clinical test in a regional medical center.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2011 May : 51(1)50-3
  • Kay M, Zerr DM, Englund JA, Cadwell BL, Kuypers J, Swenson P, Kwan-Gett TS, Bell SL, Duchin JS
    Shedding of pandemic (H1N1) 2009 virus among health care personnel, Seattle, Washington, USA.
    Emerging infectious diseases , 2011 Apr, : 17(4)639-44
  • Renaud C, Boudreault AA, Kuypers J, Lofy KH, Corey L, Boeckh MJ, Englund JA
    H275Y mutant pandemic (H1N1) 2009 virus in immunocompromised patients.
    Emerging infectious diseases , 2011 Apr, : 17(4)653-60; quiz 765
  • Cherezova L, Burnside KL, Rose TM
    Conservation of complex nuclear localization signals utilizing classical and non-classical nuclear import pathways in LANA homologs of KSHV and RFHV.
    PloS one , 2011 Apr, : 6(4)e18920
  • Oelschlager AM, Smith S, Tamura G, Carline J, Dobie S
    Where do medical students turn? The role of the assigned mentor in the fabric of support during medical school.
    Teaching and learning in medicine , 2011 Apr, : 23(2)112-7
  • Kronman MP, Hersh AL, Feng R, Huang YS, Lee GE, Shah SS
    Ambulatory visit rates and antibiotic prescribing for children with pneumonia, 1994-2007.
    Pediatrics , 2011 Mar. : 127(3)411-8
  • Moskowitz SM, Emerson JC, McNamara S, Shell RD, Orenstein DM, Rosenbluth D, Katz MF, Ahrens R, Hornick D, Joseph PM, Gibson RL, Aitken ML, Benton WW, Burns JL
    Randomized trial of biofilm testing to select antibiotics for cystic fibrosis airway infection.
    Pediatric pulmonology , 2011 Feb. : 46(2)184-92
  • Weiss AK, Hall M, Lee GE, Kronman MP, Sheffler-Collins S, Shah SS
    Adjunct corticosteroids in children hospitalized with community-acquired pneumonia.
    Pediatrics , 2011 Feb. : 127(2)e255-63
  • Müller AD, Jaspan HB, Myer L, Hunter AL, Harling G, Bekker LG, Orrell C
    Standard measures are inadequate to monitor pediatric adherence in a resource-limited setting.
    AIDS and behavior , 2011 Feb. : 15(2)422-31
  • Stekler JD, Ellis GM, Carlsson J, Eilers B, Holte S, Maenza J, Stevens CE, Collier AC, Frenkel LM
    Prevalence and impact of minority variant drug resistance mutations in primary HIV-1 infection.
    PloS one , 2011 : 6(12)e28952
  • Sha BE, Tierney C, Cohn SE, Sun X, Coombs RW, Frenkel LM, Kalams SA, Aweeka FT, Bastow B, Bardeguez A, Kmack A, Stek A, Aids Clinical Trials Group ACTG A5150 Team
    Postpartum viral load rebound in HIV-1-infected women treated with highly active antiretroviral therapy: AIDS Clinical Trials Group Protocol A5150.
    HIV clinical trials , 2011 Jan. : 9-23
  • Baeten JM, Lingappa J, Beck I, Frenkel LM, Pepper G, Celum C, Wald A, Fife KH, Were E, Mugo N, Sanchez J, Essex M, Makhema J, Kiarie J, Farquhar C, Corey L
    Herpes simplex virus type 2 suppressive therapy with acyclovir or valacyclovir does not select for specific HIV-1 resistance in HIV-1/HSV-2 dually infected persons.
    The Journal of infectious diseases , 2011 Jan. : 117-21
  • Emerging Biomarkers for the Diagnosis of Severe Neonatal Infections Applicable to Low Resource Settings
    Journal of Global Health , 2011 : 1(2)208-221
  • Epidemiology and aetiology of parasitic maternal infections in low- and middleincome countries
    Journal of Global Health , 2011 : 1(2)187-198
  • Epidemiology and aetiology of maternal bacterial and viral infections in low and middle income countries
    Journal of Global Health , 2011 : 1(2)169-185
  • A global health opportunity: the potential of multiplexed diagnostics in low resource settings
    Journal of Global Health , 2011 : 1(2)136-139
  • Young RL, Malcolm KC, Kret JE, Caceres SM, Poch KR, Nichols DP, Taylor-Cousar JL, Saavedra MT, Randell SH, Vasil ML, Burns JL, Moskowitz SM, Nick JA
    Neutrophil extracellular trap (NET)-mediated killing of Pseudomonas aeruginosa: evidence of acquired resistance within the CF airway, independent of CFTR.
    PloS one , 2011 : 6(9)e23637
  • Zembe L, Burgers WA, Jaspan HB, Bekker LG, Bredell H, Stevens G, Gilmour J, Cox JH, Fast P, Hayes P, Vardas E, Williamson C, Gray CM
    Intra- and inter-clade cross-reactivity by HIV-1 Gag specific T-cells reveals exclusive and commonly targeted regions: implications for current vaccine trials.
    PloS one , 2011 : 6(10)e26096
  • Martin ET, Kerin T, Christakis DA, Blume HK, Gospe SM Jr, Vinje J, Bowen MD, Gentsch J, Zerr DM
    Redefining outcome of first seizures by acute illness.
    Pediatrics , 2010 Dec. : 126(6)e1477-84
  • Wagner TA, Frenkel LM
    Antiretroviral treatment for HIV-infected infants exposed to nevirapine.
    JAMA : the journal of the American Medical Association , 2010 Dec. : 2589; author reply 2589-90
  • Wagner TA, Frenkel LM
    Antiretroviral treatment for HIV-infected infants exposed to nevirapine.
    JAMA : the journal of the American Medical Association , 2010 Dec. : 304(23)2589; author reply 2589-90
  • Mulcahy LR, Burns JL, Lory S, Lewis K
    Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis.
    Journal of bacteriology , 2010 Dec. : 192(23)6191-9
  • Nett RJ, Bartschi JL, Ellis GM, Hachey DM, Frenkel LM, Roscoe JC, Carter KK, Hahn CG
    Two clusters of HIV-1 infection, rural Idaho, USA, 2008.
    Emerging infectious diseases , 2010 Nov. : 1807-9
  • Levin MJ, Moscicki AB, Song LY, Fenton T, Meyer WA 3rd, Read JS, Handelsman EL, Nowak B, Sattler CA, Saah A, Radley DR, Esser MT, Weinberg A, IMPAACT P1047 Protocol Team
    Safety and immunogenicity of a quadrivalent human papillomavirus (types 6, 11, 16, and 18) vaccine in HIV-infected children 7 to 12 years old.
    Journal of acquired immune deficiency syndromes (1999) , 2010 Oct. : 197-204
  • Gantt S, Carlsson J, Heath L, Bull ME, Shetty AK, Mutsvangwa J, Musingwini G, Woelk G, Zijenah LS, Katzenstein DA, Mullins JI, Frenkel LM
    Genetic analyses of HIV-1 env sequences demonstrate limited compartmentalization in breast milk and suggest viral replication within the breast that increases with mastitis.
    Journal of virology , 2010 Oct. : 10812-9
  • Gantt S, Carlsson J, Heath L, Bull ME, Shetty AK, Mutsvangwa J, Musingwini G, Woelk G, Zijenah LS, Katzenstein DA, Mullins JI, Frenkel LM
    Genetic analyses of HIV-1 env sequences demonstrate limited compartmentalization in breast milk and suggest viral replication within the breast that increases with mastitis.
    Journal of virology , 2010 Oct. : 84(20)10812-9
  • Taylor JA, Weber WJ, Martin ET, McCarty RL, Englund JA
    Development of a symptom score for clinical studies to identify children with a documented viral upper respiratory tract infection.
    Pediatric research , 2010 Sept. : 252-7
  • Fairchok MP, Martin ET, Chambers S, Kuypers J, Behrens M, Braun LE, Englund JA
    Epidemiology of viral respiratory tract infections in a prospective cohort of infants and toddlers attending daycare.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2010 Sept. : 16-20
  • Heath L, Frenkel LM, Foley BT, Mullins JI
    Comment on "The origins of sexually transmitted HIV among men who have sex with men".
    Science translational medicine , 2010 Sept. : 50le1; author reply 50lr1
  • Curtis MM, Rowell E, Shafiani S, Negash A, Urdahl KB, Wilson CB, Way SS
    Fidelity of pathogen-specific CD4+ T cells to the Th1 lineage is controlled by exogenous cytokines, interferon-gamma expression, and pathogen lifestyle.
    Cell host & microbe , 2010 Aug. 19 : 163-73
  • Lee GE, Lorch SA, Sheffler-Collins S, Kronman MP, Shah SS
    National hospitalization trends for pediatric pneumonia and associated complications.
    Pediatrics , 2010 Aug. : 126(2)204-13
  • Shafiani S, Tucker-Heard G, Kariyone A, Takatsu K, Urdahl KB
    Pathogen-specific regulatory T cells delay the arrival of effector T cells in the lung during early tuberculosis.
    The Journal of experimental medicine , 2010 July 5 : 1409-20
  • Singleton RJ, Bulkow LR, Miernyk K, DeByle C, Pruitt L, Hummel KB, Bruden D, Englund JA, Anderson LJ, Lucher L, Holman RC, Hennessy TW
    Viral respiratory infections in hospitalized and community control children in Alaska.
    Journal of medical virology , 2010 July : 82(7)1282-90
  • Singleton RJ, Bulkow LR, Miernyk K, DeByle C, Pruitt L, Hummel KB, Bruden D, Englund JA, Anderson LJ, Lucher L, Holman RC, Hennessy TW
    Viral respiratory infections in hospitalized and community control children in Alaska.
    Journal of medical virology , 2010 July : 1282-90
  • Lembo A, Gurney MA, Burnside K, Banerjee A, de los Reyes M, Connelly JE, Lin WJ, Jewell KA, Vo A, Renken CW, Doran KS, Rajagopal L
    Regulation of CovR expression in Group B Streptococcus impacts blood-brain barrier penetration.
    Molecular microbiology , 2010 July : 77(2)431-43
  • Elliott D, Burns JL, Hoffman LR
    Exploratory study of the prevalence and clinical significance of tobramycin-mediated biofilm induction in Pseudomonas aeruginosa isolates from cystic fibrosis patients.
    Antimicrobial agents and chemotherapy , 2010 July : 54(7)3024-6
  • Walter EB, Rajagopal S, Zhu Y, Neuzil KM, Fairchok MP, Englund JA
    Trivalent inactivated influenza vaccine (TIV) immunogenicity in children 6 through 23 months of age: do children of all ages respond equally?
    Vaccine , 2010 June 17 : 28(27)4376-83
  • Walter EB, Rajagopal S, Zhu Y, Neuzil KM, Fairchok MP, Englund JA
    Trivalent inactivated influenza vaccine (TIV) immunogenicity in children 6 through 23 months of age: do children of all ages respond equally?
    Vaccine , 2010 June 17 : 4376-83
  • Blish CA, Sangaré L, Herrin BR, Richardson BA, John-Stewart G, Walson JL
    Changes in plasma cytokines after treatment of ascaris lumbricoides infection in individuals with HIV-1 infection.
    The Journal of infectious diseases , 2010 June 15 : 1816-21
  • Martin ET, Fairchok MP, Kuypers J, Magaret A, Zerr DM, Wald A, Englund JA
    Frequent and prolonged shedding of bocavirus in young children attending daycare.
    The Journal of infectious diseases , 2010 June 1 : 1625-32
  • Martin ET, Fairchok MP, Kuypers J, Magaret A, Zerr DM, Wald A, Englund JA
    Frequent and prolonged shedding of bocavirus in young children attending daycare.
    The Journal of infectious diseases , 2010 June 1 : 1625-32
  • Burnside K, Lembo A, de Los Reyes M, Iliuk A, Binhtran NT, Connelly JE, Lin WJ, Schmidt BZ, Richardson AR, Fang FC, Tao WA, Rajagopal L
    Regulation of hemolysin expression and virulence of Staphylococcus aureus by a serine/threonine kinase and phosphatase.
    PloS one , 2010 June : 5(6)e11071
  • Quan PL, Wagner TA, Briese T, Torgerson TR, Hornig M, Tashmukhamedova A, Firth C, Palacios G, Baisre-De-Leon A, Paddock CD, Hutchison SK, Egholm M, Zaki SR, Goldman JE, Ochs HD, Lipkin WI
    Astrovirus encephalitis in boy with X-linked agammaglobulinemia.
    Emerging infectious diseases , 2010 June : 16(6)918-25
  • Campbell AP, Jacob ST, Kuypers J, Wald A, Englund JA, Corey L, Boeckh M
    Respiratory failure caused by 2009 novel influenza A/H1N1 in a hematopoietic stem-cell transplant recipient: Detection of extrapulmonary H1N1 RNA and use of intravenous peramivir.
    Annals of internal medicine , 2010 May 4 : 619-20
  • Jourdain G, Wagner TA, Ngo-Giang-Huong N, Sirirungsi W, Klinbuayaem V, Fregonese F, Nantasen I, Techapornroong M, Halue G, Nilmanat A, Wittayapraparat P, Chalermpolprapa V, Pathipvanich P, Yuthavisuthi P, Frenkel LM, Lallemant M
    Association between detection of HIV-1 DNA resistance mutations by a sensitive assay at initiation of antiretroviral therapy and virologic failure.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2010 May : 1397-404
  • Micek MA, Blanco AJ, Beck IA, Dross S, Matunha L, Montoya P, Seidel K, Gantt S, Matediane E, Jamisse L, Gloyd S, Frenkel LM
    Nevirapine resistance by timing of HIV type 1 infection in infants treated with single-dose nevirapine.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2010 May : 1405-14
  • Wagner TA, Kress CM, Beck I, Techapornroong M, Wittayapraparat P, Tansuphasawasdikul S, Jourdain G, Ngo-Giang-Huong N, Lallemant M, Frenkel LM
    Detection of HIV-1 drug resistance in women following administration of a single dose of nevirapine: comparison of plasma RNA to cellular DNA by consensus sequencing and by oligonucleotide ligation assay.
    Journal of clinical microbiology , 2010 May : 48(5)1555-61
  • Jourdain G, Wagner TA, Ngo-Giang-Huong N, Sirirungsi W, Klinbuayaem V, Fregonese F, Nantasen I, Techapornroong M, Halue G, Nilmanat A, Wittayapraparat P, Chalermpolprapa V, Pathipvanich P, Yuthavisuthi P, Frenkel LM, Lallemant M, Program for HIV Prevention and Treatment (PHPT) Study Group
    Association between detection of HIV-1 DNA resistance mutations by a sensitive assay at initiation of antiretroviral therapy and virologic failure.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2010 May : 50(10)1397-404
  • Wagner TA, Kress CM, Beck I, Techapornroong M, Wittayapraparat P, Tansuphasawasdikul S, Jourdain G, Ngo-Giang-Huong N, Lallemant M, Frenkel LM
    Detection of HIV-1 drug resistance in women following administration of a single dose of nevirapine: comparison of plasma RNA to cellular DNA by consensus sequencing and by oligonucleotide ligation assay.
    Journal of clinical microbiology , 2010 May : 1555-61
  • Saiman L, Anstead M, Mayer-Hamblett N, Lands LC, Kloster M, Hocevar-Trnka J, Goss CH, Rose LM, Burns JL, Marshall BC, Ratjen F, AZ0004 Azithromycin Study Group
    Effect of azithromycin on pulmonary function in patients with cystic fibrosis uninfected with Pseudomonas aeruginosa: a randomized controlled trial.
    JAMA : the journal of the American Medical Association , 2010 May : 303(17)1707-15
  • Jaspan HB, Brothers AW, Campbell AJ, McGuire JK, Browd SR, Manley TJ, Pak D, Weissman SJ
    Multidrug-resistant Enterococcus faecium meningitis in a toddler: characterization of the organism and successful treatment with intraventricular daptomycin and intravenous tigecycline.
    The Pediatric infectious disease journal , 2010 Apr, : 379-81
  • Gessain A, Rose TM, Lavergne A, Lacoste V
    Comment on Mugisha et al. J Med Primatol 2010; 39: 71-76.
    Journal of medical primatology , 2010 Apr,
  • Emerson J, McNamara S, Buccat AM, Worrell K, Burns JL
    Changes in cystic fibrosis sputum microbiology in the United States between 1995 and 2008.
    Pediatric pulmonology , 2010 Apr, : 45(4)363-70
  • Jaspan HB, Brothers AW, Campbell AJ, McGuire JK, Browd SR, Manley TJ, Pak D, Weissman SJ
    Multidrug-resistant Enterococcus faecium meningitis in a toddler: characterization of the organism and successful treatment with intraventricular daptomycin and intravenous tigecycline.
    The Pediatric infectious disease journal , 2010 Apr, : 29(4)379-81
  • Walson JL, Stewart BT, Sangaré L, Mbogo LW, Otieno PA, Piper BK, Richardson BA, John-Stewart G
    Prevalence and correlates of helminth co-infection in Kenyan HIV-1 infected adults.
    PLoS neglected tropical diseases , 2010 Mar. 30 : e644
  • Milano F, Campbell AP, Guthrie KA, Kuypers J, Englund JA, Corey L, Boeckh M
    Human rhinovirus and coronavirus detection among allogeneic hematopoietic stem cell transplantation recipients.
    Blood , 2010 Mar. 11 : 2088-94
  • Lallemant M, Ngo-Giang-Huong N, Jourdain G, Traisaithit P, Cressey TR, Collins IJ, Jarupanich T, Sukhumanant T, Achalapong J, Sabsanong P, Chotivanich N, Winiyakul N, Ariyadej S, Kanjanasing A, Ratanakosol J, Hemvuttiphan J, Kengsakul K, Wannapira W, Sittipiyasakul V, Pornkitprasarn W, Liampongsabuddhi P, McIntosh K, Van Dyke RB, Frenkel LM, Koetsawang S, Le Coeur S, Kanchana S
    Efficacy and safety of 1-month postpartum zidovudine-didanosine to prevent HIV-resistance mutations after intrapartum single-dose nevirapine.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2010 Mar. : 898-908
  • Casper C, Englund J, Boeckh M
    How I treat influenza in patients with hematologic malignancies.
    Blood , 2010 Feb. 18 : 115(7)1331-42
  • Englund JA, Walter E, Black S, Blatter M, Nyberg J, Ruben FL, Decker MD, GRC28 Study Team
    Safety and immunogenicity of trivalent inactivated influenza vaccine in infants: a randomized double-blind placebo-controlled study.
    The Pediatric infectious disease journal , 2010 Feb. : 29(2)105-10
  • Englund JA, Walter E, Black S, Blatter M, Nyberg J, Ruben FL, Decker MD
    Safety and immunogenicity of trivalent inactivated influenza vaccine in infants: a randomized double-blind placebo-controlled study.
    The Pediatric infectious disease journal , 2010 Feb. : 105-10
  • Mitchell C, Kraft K, Peterson D, Frenkel L
    Cross-contamination during processing of dried blood spots used for rapid diagnosis of HIV-1 infection of infants is rare and avoidable.
    Journal of virological methods , 2010 Feb. : 489-91
  • Advisory Committee on Immunization Practices
    Recommended adult immunization schedule: United States, 2010.
    Annals of internal medicine , 2010 Jan. 5 : 152(1)36-9
  • iCODEHOP: Interactive Consensus Degenerate Hybrid Oligonucleotide Primers
    http://dbmi-icode-01.dbmi.pitt.edu/i-codehop-context/ , 2010
  • King P, Lomovskaya O, Griffith DC, Burns JL, Dudley MN
    In vitro pharmacodynamics of levofloxacin and other aerosolized antibiotics under multiple conditions relevant to chronic pulmonary infection in cystic fibrosis.
    Antimicrobial agents and chemotherapy , 2010 Jan. : 54(1)143-8
  • Hoffman LR, Richardson AR, Houston LS, Kulasekara HD, Martens-Habbena W, Klausen M, Burns JL, Stahl DA, Hassett DJ, Fang FC, Miller SI
    Nutrient availability as a mechanism for selection of antibiotic tolerant Pseudomonas aeruginosa within the CF airway.
    PLoS pathogens , 2010 Jan. : 6(1)e1000712
  • Martin ET, Taylor J, Kuypers J, Magaret A, Wald A, Zerr D, Englund JA
    Detection of bocavirus in saliva of children with and without respiratory illness.
    Journal of clinical microbiology , 2009 Dec. : 47(12)4131-2
  • Martin ET, Taylor J, Kuypers J, Magaret A, Wald A, Zerr D, Englund JA
    Detection of bocavirus in saliva of children with and without respiratory illness.
    Journal of clinical microbiology , 2009 Dec. : 4131-2
  • Walter EB, Englund JA, Blatter M, Nyberg J, Ruben FL, Decker MD
    Trivalent inactivated influenza virus vaccine given to two-month-old children: an off-season pilot study.
    The Pediatric infectious disease journal , 2009 Dec. : 1099-104
  • Stahlhut SG, Tchesnokova V, Struve C, Weissman SJ, Chattopadhyay S, Yakovenko O, Aprikian P, Sokurenko EV, Krogfelt KA
    Comparative structure-function analysis of mannose-specific FimH adhesins from Klebsiella pneumoniae and Escherichia coli.
    Journal of bacteriology , 2009 Nov. : 6592-601
  • Verghese PS, Finn LS, Englund JA, Sanders JE, Hingorani SR
    BK nephropathy in pediatric hematopoietic stem cell transplant recipients.
    Pediatric transplantation , 2009 Nov. : 913-8
  • Chi BH, Ellis GM, Chintu N, Cantrell RA, Sinkala M, Aldrovandi GM, Warrier R, Mbewe F, Nakamura K, Stringer EM, Frenkel LM, Stringer JS
    Intrapartum tenofovir and emtricitabine reduces low-concentration drug resistance selected by single-dose nevirapine for perinatal HIV prevention.
    AIDS research and human retroviruses , 2009 Nov. : 1099-106
  • Bruce AG, Bakke AM, Gravett CA, DeMaster LK, Bielefeldt-Ohmann H, Burnside KL, Rose TM
    The ORF59 DNA polymerase processivity factor homologs of Old World primate RV2 rhadinoviruses are highly conserved nuclear antigens expressed in differentiated epithelium in infected macaques.
    Virology journal , 2009 Nov. : 205
  • Greengrass V, Lohman B, Morris L, Plate M, Steele PM, Walson JL, Crowe SM
    Assessment of the low-cost Cavidi ExaVir Load assay for monitoring HIV viral load in pediatric and adult patients.
    Journal of acquired immune deficiency syndromes (1999) , 2009 Nov. 1 : 387-90
  • MacLeod DL, Barker LM, Sutherland JL, Moss SC, Gurgel JL, Kenney TF, Burns JL, Baker WR
    Antibacterial activities of a fosfomycin/tobramycin combination: a novel inhaled antibiotic for bronchiectasis.
    The Journal of antimicrobial chemotherapy , 2009 Oct. : 64(4)829-36
  • Patel K, Ming X, Williams PL, Robertson KR, Oleske JM, Seage GR 3rd
    Impact of HAART and CNS-penetrating antiretroviral regimens on HIV encephalopathy among perinatally infected children and adolescents.
    AIDS (London, England) , 2009 Sept. 10 : 1893-901
  • Weinberg A, Huang S, Fenton T, Patterson-Bartlett J, Gona P, Read JS, Dankner WM, Nachman S
    Virologic and immunologic correlates with the magnitude of antibody responses to the hepatitis A vaccine in HIV-infected children on highly active antiretroviral treatment.
    Journal of acquired immune deficiency syndromes (1999) , 2009 Sept. 1 : 17-24
  • Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R, Mullins J, Frenkel L
    Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.
    PloS one , 2009 Sept. : e7122
  • Weinberg A, Huang S, Fenton T, Patterson-Bartlett J, Gona P, Read JS, Dankner WM, Nachman S
    Virologic and immunologic correlates with the magnitude of antibody responses to the hepatitis A vaccine in HIV-infected children on highly active antiretroviral treatment.
    Journal of acquired immune deficiency syndromes (1999) , 2009 Sept. : 17-24
  • Staheli JP, Ryan JT, Bruce AG, Boyce R, Rose TM
    Consensus-degenerate hybrid oligonucleotide primers (CODEHOPs) for the detection of novel viruses in non-human primates.
    Methods (San Diego, Calif.) , 2009 Sept. : 32-41
  • Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R, Mullins J, Frenkel L
    Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.
    PloS one , 2009 Sept. : 4(9)e7122
  • Chernoff M, Nachman S, Williams P, Brouwers P, Heston J, Hodge J, Di Poalo V, Deygoo NS, Gadow KD, IMPAACT P1055 Study Team
    Mental health treatment patterns in perinatally HIV-infected youth and controls.
    Pediatrics , 2009 Aug. : 627-36
  • Walson JL, Herrin BR, John-Stewart G
    Deworming helminth co-infected individuals for delaying HIV disease progression.
    Cochrane database of systematic reviews (Online) , 2009 July 8 : CD006419
  • Berman N, Fall LH, Smith S, Levine DA, Maloney CG, Potts M, Siegel B, Foster-Johnson L
    Integration strategies for using virtual patients in clinical clerkships.
    Academic medicine : journal of the Association of American Medical Colleges , 2009 July : 942-9
  • Chattopadhyay S, Weissman SJ, Minin VN, Russo TA, Dykhuizen DE, Sokurenko EV
    High frequency of hotspot mutations in core genes of Escherichia coli due to short-term positive selection.
    Proceedings of the National Academy of Sciences of the United States of America , 2009 July : 12412-7
  • Ellis GM, Page LC, Burman BE, Buskin S, Frenkel LM
    Increased detection of HIV-1 drug resistance at time of diagnosis by testing viral DNA with a sensitive assay.
    Journal of acquired immune deficiency syndromes (1999) , 2009 July : 283-9
  • Boyce R, Chilana P, Rose TM
    iCODEHOP: a new interactive program for designing COnsensus-DEgenerate Hybrid Oligonucleotide Primers from multiply aligned protein sequences.
    Nucleic acids research , 2009 July : W222-8
  • Bull ME, Learn GH, McElhone S, Hitti J, Lockhart D, Holte S, Dragavon J, Coombs RW, Mullins JI, Frenkel LM
    Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus.
    Journal of virology , 2009 June : 6020-8
  • Koch MA, Tucker-Heard G, Perdue NR, Killebrew JR, Urdahl KB, Campbell DJ
    The transcription factor T-bet controls regulatory T cell homeostasis and function during type 1 inflammation.
    Nature immunology , 2009 June : 595-602
  • Bull ME, Learn GH, McElhone S, Hitti J, Lockhart D, Holte S, Dragavon J, Coombs RW, Mullins JI, Frenkel LM
    Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus.
    Journal of virology , 2009 June : 83(12)6020-8
  • Wagner TA, Tobin NH, McKernan JL, Xu M, Melvin AJ, Mohan KM, Learn GH, Mullins JI, Frenkel LM
    Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses.
    AIDS (London, England) , 2009 May 15 : 923-8
  • Cressey TR, Van Dyke R, Jourdain G, Puthanakit T, Roongpisuthipong A, Achalapong J, Yuthavisuthi P, Prommas S, Chotivanich N, Maupin R, Smith E, Shapiro DE, Mirochnick M, IMPAACT P1032 Team
    Early postpartum pharmacokinetics of lopinavir initiated intrapartum in Thai women.
    Antimicrobial agents and chemotherapy , 2009 May : 2189-91
  • Lin CH, Sloan DD, Dang CH, Wagner T, Cabrera AJ, Tobin NH, Frenkel LM, Jerome KR
    Assessment of mitochondrial toxicity by analysis of mitochondrial protein expression in mononuclear cells.
    Cytometry. Part B, Clinical cytometry , 2009 May : 181-90
  • Wagner TA, Tobin NH, McKernan JL, Xu M, Melvin AJ, Mohan KM, Learn GH, Mullins JI, Frenkel LM
    Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses.
    AIDS (London, England) , 2009 May : 923-8
  • Silvestroni A, Jewell KA, Lin WJ, Connelly JE, Ivancic MM, Tao WA, Rajagopal L
    Identification of serine/threonine kinase substrates in the human pathogen group B streptococcus.
    Journal of proteome research , 2009 May : 8(5)2563-74
  • Lin CH, Sloan DD, Dang CH, Wagner T, Cabrera AJ, Tobin NH, Frenkel LM, Jerome KR
    Assessment of mitochondrial toxicity by analysis of mitochondrial protein expression in mononuclear cells.
    Cytometry. Part B, Clinical cytometry , 2009 May : 76(3)181-90
  • Wagner TA, Tobin NH, McKernan JL, Xu M, Melvin AJ, Mohan KM, Learn GH, Mullins JI, Frenkel LM
    Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses.
    AIDS (London, England) , 2009 May : 23(8)923-8
  • Treggiari MM, Rosenfeld M, Mayer-Hamblett N, Retsch-Bogart G, Gibson RL, Williams J, Emerson J, Kronmal RA, Ramsey BW, EPIC Study Group
    Early anti-pseudomonal acquisition in young patients with cystic fibrosis: rationale and design of the EPIC clinical trial and observational study'.
    Contemporary clinical trials , 2009 May : 30(3)256-68
  • Harper SA, Bradley JS, Englund JA, File TM, Gravenstein S, Hayden FG, McGeer AJ, Neuzil KM, Pavia AT, Tapper ML, Uyeki TM, Zimmerman RK
    Seasonal influenza in adults and children--diagnosis, treatment, chemoprophylaxis, and institutional outbreak management: clinical practice guidelines of the Infectious Diseases Society of America.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2009 Apr, 15 : 1003-32
  • Goodell L, Smith S, Maestas RR, James J
    First-year medical students' perspectives on continuity of care.
    Family medicine , 2009 Mar. : 175-81
  • Stahlhut SG, Chattopadhyay S, Struve C, Weissman SJ, Aprikian P, Libby SJ, Fang FC, Krogfelt KA, Sokurenko EV
    Population variability of the FimH type 1 fimbrial adhesin in Klebsiella pneumoniae.
    Journal of bacteriology , 2009 Mar. : 1941-50
  • Lin WJ, Walthers D, Connelly JE, Burnside K, Jewell KA, Kenney LJ, Rajagopal L
    Threonine phosphorylation prevents promoter DNA binding of the Group B Streptococcus response regulator CovR.
    Molecular microbiology , 2009 Mar. : 71(6)1477-95
  • Understanding the regulation of Group B Streptococcal virulence factors.
    Future microbiology , 2009 Mar. : 4(2)201-21
  • Nachman SA, Chernoff M, Gona P, Van Dyke RB, Dankner WM, Seage GR 3rd, Oleske J, Williams PL
    Incidence of noninfectious conditions in perinatally HIV-infected children and adolescents in the HAART era.
    Archives of pediatrics & adolescent medicine , 2009 Feb. : 164-71
  • Stempel HE, Martin ET, Kuypers J, Englund JA, Zerr DM
    Multiple viral respiratory pathogens in children with bronchiolitis.
    Acta paediatrica (Oslo, Norway : 1992) , 2009 Jan. : 98(1)123-6
  • Stempel HE, Martin ET, Kuypers J, Englund JA, Zerr DM
    Multiple viral respiratory pathogens in children with bronchiolitis.
    Acta paediatrica (Oslo, Norway : 1992) , 2009 Jan. : 123-6
  • Stempel HE, Martin ET, Kuypers J, Englund JA, Zerr DM
    Multiple viral respiratory pathogens in children with bronchiolitis.
    Acta paediatrica (Oslo, Norway : 1992) , 2009 Jan. : 98(1)123-6
  • Stempel HE, Martin ET, Kuypers J, Englund JA, Zerr DM
    Multiple viral respiratory pathogens in children with bronchiolitis.
    Acta paediatrica (Oslo, Norway : 1992) , 2009 Jan. : 123-6
  • Hoffman LR, Kulasekara HD, Emerson J, Houston LS, Burns JL, Ramsey BW, Miller SI
    Pseudomonas aeruginosa lasR mutants are associated with cystic fibrosis lung disease progression.
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2009 Jan. : 8(1)66-70
  • Hoffman LR, Kulasekara HD, Emerson J, Houston LS, Burns JL, Ramsey BW, Miller SI
    Pseudomonas aeruginosa lasR mutants are associated with cystic fibrosis lung disease progression.
    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society , 2009 Jan. : 8(1)66-70
  • Müller AD, Myer L, Jaspan H
    Virological suppression achieved with suboptimal adherence levels among South African children receiving boosted protease inhibitor-based antiretroviral therapy.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2009 Jan. 1 : 48(1)e3-5
  • Martin ET, Kuypers J, Heugel J, Englund JA
    Clinical disease and viral load in children infected with respiratory syncytial virus or human metapneumovirus.
    Diagnostic microbiology and infectious disease , 2008 Dec. : 62(4)382-8
  • Martin ET, Kuypers J, Heugel J, Englund JA
    Clinical disease and viral load in children infected with respiratory syncytial virus or human metapneumovirus.
    Diagnostic microbiology and infectious disease , 2008 Dec. : 382-8
  • Qin X, Zerr DM, Weissman SJ, Englund JA, Denno DM, Klein EJ, Tarr PI, Kwong J, Stapp JR, Tulloch LG, Galanakis E
    Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience.
    Antimicrobial agents and chemotherapy , 2008 Nov. : 52(11)3909-14
  • Qin X, Zerr DM, Weissman SJ, Englund JA, Denno DM, Klein EJ, Tarr PI, Kwong J, Stapp JR, Tulloch LG, Galanakis E
    Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience.
    Antimicrobial agents and chemotherapy , 2008 Nov. : 3909-14
  • Qin X, Zerr DM, Weissman SJ, Englund JA, Denno DM, Klein EJ, Tarr PI, Kwong J, Stapp JR, Tulloch LG, Galanakis E
    Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience.
    Antimicrobial agents and chemotherapy , 2008 Nov. : 3909-14
  • Qin X, Zerr DM, Weissman SJ, Englund JA, Denno DM, Klein EJ, Tarr PI, Kwong J, Stapp JR, Tulloch LG, Galanakis E
    Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience.
    Antimicrobial agents and chemotherapy , 2008 Nov. : 3909-14
  • Wagner TA, Frenkel LM
    Potential limitation of CCR5 antagonists: drug resistance more often linked to CXCR4-utilizing than to CCR5-utilizing HIV-1.
    AIDS (London, England) , 2008 Nov. : 2393-5
  • Wagner TA, Frenkel LM
    Potential limitation of CCR5 antagonists: drug resistance more often linked to CXCR4-utilizing than to CCR5-utilizing HIV-1.
    AIDS (London, England) , 2008 Nov. : 22(17)2393-5
  • Jaspan HB, Berrisford AE, Boulle AM
    Two-year outcomes of children on non-nucleoside reverse transcriptase inhibitor and protease inhibitor regimens in a South African pediatric antiretroviral program.
    The Pediatric infectious disease journal , 2008 Nov. : 27(11)993-8
  • Jaspan HB, Soka NF, Strode AE, Mathews C, Mark D, Flisher AJ, Wood R, Bekker LG
    Community perspectives on the ethical issues surrounding adolescent HIV vaccine trials in South Africa.
    Vaccine , 2008 Oct. 23 : 26(45)5679-83
  • Buskin SE, Ellis GM, Pepper GG, Frenkel LM, Pergam SA, Gottlieb GS, Horwitch C, Olliffe JF, Johnson K, Shalit P, Heinen C, Schwartz M, Wood RW
    Transmission cluster of multiclass highly drug-resistant HIV-1 among 9 men who have sex with men in Seattle/King County, WA, 2005-2007.
    Journal of acquired immune deficiency syndromes (1999) , 2008 Oct. : 205-11
  • Jaspan HB, Huang LC, Cotton MF, Whitelaw A, Myer L
    Bacterial disease and antimicrobial susceptibility patterns in HIV-infected, hospitalized children: a retrospective cohort study.
    PloS one , 2008 Sept. 24 : 3(9)e3260
  • Huang LC, Myer L, Jaspan HB
    The role of polyclonal intravenous immunoglobulin in treating HIV-infected children with severe bacterial infections: a retrospective cohort study.
    BMC infectious diseases , 2008 Sept. 24 : 8127
  • Adler AL, Casper C, Boeckh M, Heath J, Zerr DM
    An outbreak of varicella with likely breakthrough disease in a population of pediatric cancer patients.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2008 Sept. : 866-70
  • Mitchell C, Jennings C, Brambilla D, Aldrovandi G, Amedee AM, Beck I, Bremer JW, Coombs R, Decker D, Fiscus S, Fitzgibbon J, Luzuriaga K, Moye J, Palumbo P, Reichelderfer P, Somasundaran M, Stevens W, Frenkel L, Dried Blood Spot Working Group of the Infant Maternal Pediatric Adolescent AIDS Clinical Trials Network
    Diminished human immunodeficiency virus type 1 DNA yield from dried blood spots after storage in a humid incubator at 37 degrees C compared to -20 degrees C.
    Journal of clinical microbiology , 2008 Sept. : 2945-9
  • Walson JL, Otieno PA, Mbuchi M, Richardson BA, Lohman-Payne B, Macharia SW, Overbaugh J, Berkley J, Sanders EJ, Chung MH, John-Stewart GC
    Albendazole treatment of HIV-1 and helminth co-infection: a randomized, double-blind, placebo-controlled trial.
    AIDS (London, England) , 2008 Aug. 20 : 1601-9
  • Hare CB, Mellors J, Krambrink A, Su Z, Skiest D, Margolis DM, Patel SS, Barnas D, Frenkel L, Coombs RW, Aweeka F, Morse GD, Haas DW, Boltz V, Palmer S, Coffin J, Havlir DV
    Detection of nonnucleoside reverse-transcriptase inhibitor-resistant HIV-1 after discontinuation of virologically suppressive antiretroviral therapy.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2008 Aug. : 421-4
  • Beck IA, Crowell C, Kittoe R, Bredell H, Machaba M, Willamson C, Janssens W, Jallow S, van der Groen G, Shao Y, Jacob M, Samuel NM, de Rivera IL, Ngo-Giang-Huong N, Cassol S, Alemnji G, Frenkel LM
    Optimization of the oligonucleotide ligation assay, a rapid and inexpensive test for detection of HIV-1 drug resistance mutations, for non-North American variants.
    Journal of acquired immune deficiency syndromes (1999) , 2008 Aug. : 418-27
  • Gantt S, Carlsson J, Shetty AK, Seidel KD, Qin X, Mutsvangwa J, Musingwini G, Woelk G, Zijenah LS, Katzenstein DA, Frenkel LM
    Cytomegalovirus and Epstein-Barr virus in breast milk are associated with HIV-1 shedding but not with mastitis.
    AIDS (London, England) , 2008 July : 1453-60
  • Williams PL, Van Dyke R, Eagle M, Smith D, Vincent C, Ciupak G, Oleske J, Seage GR 3rd
    Association of site-specific and participant-specific factors with retention of children in a long-term pediatric HIV cohort study.
    American journal of epidemiology , 2008 June 1 : 1375-86
  • Patel K, Hernán MA, Williams PL, Seeger JD, McIntosh K, Dyke RB, Seage GR 3rd
    Long-term effects of highly active antiretroviral therapy on CD4+ cell evolution among children and adolescents infected with HIV: 5 years and counting.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2008 June 1 : 1751-60
  • Borkowsky W, Yogev R, Muresan P, McFarland E, Frenkel L, Fenton T, Capparelli E, Moye J, Harding P, Ellis N, Heckman B, Kraimer J
    Structured treatment interruptions (STIs) in HIV-1 infected pediatric populations increases interferon gamma production and reduces viremia.
    Vaccine , 2008 June : 3086-9
  • Hayden HS, Gillett W, Saenphimmachak C, Lim R, Zhou Y, Jacobs MA, Chang J, Rohmer L, D'Argenio DA, Palmieri A, Levy R, Haugen E, Wong GK, Brittnacher MJ, Burns JL, Miller SI, Olson MV, Kaul R
    Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients.
    Genomics , 2008 June : 91(6)530-7
  • Hayden HS, Gillett W, Saenphimmachak C, Lim R, Zhou Y, Jacobs MA, Chang J, Rohmer L, D'Argenio DA, Palmieri A, Levy R, Haugen E, Wong GK, Brittnacher MJ, Burns JL, Miller SI, Olson MV, Kaul R
    Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients.
    Genomics , 2008 June : 91(6)530-7
  • Kronman MP, Hall M, Slonim AD, Shah SS
    Charges and lengths of stay attributable to adverse patient-care events using pediatric-specific quality indicators: a multicenter study of freestanding children's hospitals.
    Pediatrics , 2008 June : 121(6)e1653-9
  • Tasian SK, Park JR, Martin ET, Englund JA
    Influenza-associated morbidity in children with cancer.
    Pediatric blood & cancer , 2008 May : 50(5)983-7
  • Tasian SK, Park JR, Martin ET, Englund JA
    Influenza-associated morbidity in children with cancer.
    Pediatric blood & cancer , 2008 May : 983-7
  • Hull JR, Tamura GS, Castner DG
    Interactions of the streptococcal C5a peptidase with human fibronectin.
    Acta biomaterialia , 2008 May : 4(3)504-13
  • Hull JR, Tamura GS, Castner DG
    Interactions of the streptococcal C5a peptidase with human fibronectin.
    Acta biomaterialia , 2008 May : 504-13
  • Tassiopoulos K, Williams PL, Seage GR 3rd, Crain M, Oleske J, Farley J
    Association of hypercholesterolemia incidence with antiretroviral treatment, including protease inhibitors, among perinatally HIV-infected children.
    Journal of acquired immune deficiency syndromes (1999) , 2008 Apr, 15 : 607-14
  • Yilmaz O, Yao L, Maeda K, Rose TM, Lewis EL, Duman M, Lamont RJ, Ojcius DM
    ATP scavenging by the intracellular pathogen Porphyromonas gingivalis inhibits P2X7-mediated host-cell apoptosis.
    Cellular microbiology , 2008 Apr, : 863-75
  • Borkowsky W, Yogev R, Muresan P, McFarland E, Frenkel L, Fenton T, Capparelli E, Moye J, Harding P, Ellis N, Heckman B, Kraimer J
    Planned multiple exposures to autologous virus in HIV type 1-infected pediatric populations increases HIV-specific immunity and reduces HIV viremia.
    AIDS research and human retroviruses , 2008 Mar. : 401-11
  • Barcy S, De Rosa SC, Vieira J, Diem K, Ikoma M, Casper C, Corey L
    Gamma delta+ T cells involvement in viral immune control of chronic human herpesvirus 8 infection.
    Journal of immunology (Baltimore, Md. : 1950) , 2008 Mar. : 180(5)3417-25
  • Latta LC, Dick R, Parry C, Tamura GS
    Parental responses to involvement in rounds on a pediatric inpatient unit at a teaching hospital: a qualitative study.
    Academic medicine : journal of the Association of American Medical Colleges , 2008 Mar. : 83(3)292-7
  • Latta LC, Dick R, Parry C, Tamura GS
    Parental responses to involvement in rounds on a pediatric inpatient unit at a teaching hospital: a qualitative study.
    Academic medicine : journal of the Association of American Medical Colleges , 2008 Mar. : 292-7
  • Zerr DM, Englund JA, Robertson AS, Marcuse EK, Garrison MM, Christakis DA
    Hospital-based influenza vaccination of children: an opportunity to prevent subsequent hospitalization.
    Pediatrics , 2008 Feb. : 121(2)345-8
  • Zerr DM, Englund JA, Robertson AS, Marcuse EK, Garrison MM, Christakis DA
    Hospital-based influenza vaccination of children: an opportunity to prevent subsequent hospitalization.
    Pediatrics , 2008 Feb. : 345-8
  • Zerr DM, Englund JA, Robertson AS, Marcuse EK, Garrison MM, Christakis DA
    Hospital-based influenza vaccination of children: an opportunity to prevent subsequent hospitalization.
    Pediatrics , 2008 Feb. : 345-8
  • Garrigues HJ, Rubinchikova YE, Dipersio CM, Rose TM
    Integrin alphaVbeta3 Binds to the RGD motif of glycoprotein B of Kaposi's sarcoma-associated herpesvirus and functions as an RGD-dependent entry receptor.
    Journal of virology , 2008 Feb. : 1570-80
  • Melvin AJ, Kang M, Hitti J, Livingston E, Cohn SE, Stocker V, Ross AC, Watts H, McComsey GA
    Cord blood lipids in infants born to HIV-1-infected women treated with combination antiretroviral therapy.
    Antiviral therapy , 2008 : 349-55
  • Posfay-Barbe KM, Zerr DM, Pittet D
    Infection control in paediatrics.
    The Lancet infectious diseases , 2008 Jan. : 8(1)19-31
  • Posfay-Barbe KM, Zerr DM, Pittet D
    Infection control in paediatrics.
    The Lancet infectious diseases , 2008 Jan. : 19-31
  • Retsch-Bogart GZ, Burns JL, Otto KL, Liou TG, McCoy K, Oermann C, Gibson RL, AZLI Phase II Study Group
    A phase 2 study of aztreonam lysine for inhalation to treat patients with cystic fibrosis and Pseudomonas aeruginosa infection.
    Pediatric pulmonology , 2008 Jan. : 43(1)47-58
  • Retsch-Bogart GZ, Burns JL, Otto KL, Liou TG, McCoy K, Oermann C, Gibson RL, AZLI Phase II Study Group
    A phase 2 study of aztreonam lysine for inhalation to treat patients with cystic fibrosis and Pseudomonas aeruginosa infection.
    Pediatric pulmonology , 2008 Jan. : 43(1)47-58
  • Jaspan HB, Cunningham CK, Tucker TJ, Wright PF, Self SG, Sheets RL, Rogers AS, Bekker LG, Wilson CM, Duerr A, Wasserheit JN, HIV Vaccine Adolescent Trials Working Group
    Inclusion of adolescents in preventive HIV vaccine trials: public health policy and research design at a crossroads.
    Journal of acquired immune deficiency syndromes (1999) , 2008 Jan. 1 : 47(1)86-92
  • Walson JL, John-Stewart G
    Treatment of helminth co-infection in individuals with HIV-1: A systematic review of the literature.
    PLoS neglected tropical diseases , 2007 Dec. 19 : e102
  • Gomez-Duarte OG, Chattopadhyay S, Weissman SJ, Giron JA, Kaper JB, Sokurenko EV
    Genetic diversity of the gene cluster encoding longus, a type IV pilus of enterotoxigenic Escherichia coli.
    Journal of bacteriology , 2007 Dec. : 9145-9
  • Gray GC, McCarthy T, Lebeck MG, Schnurr DP, Russell KL, Kajon AE, Landry ML, Leland DS, Storch GA, Ginocchio CC, Robinson CC, Demmler GJ, Saubolle MA, Kehl SC, Selvarangan R, Miller MB, Chappell JD, Zerr DM, Kiska DL, Halstead DC, Capuano AW, Setterquist SF, Chorazy ML, Dawson JD, Erdman DD
    Genotype prevalence and risk factors for severe clinical adenovirus infection, United States 2004-2006.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2007 Nov. 1 : 1120-31
  • Hull JR, Tamura GS, Castner DG
    Structure and reactivity of adsorbed fibronectin films on mica.
    Biophysical journal , 2007 Oct. 15 : 2852-60
  • Walson JL, Brown ER, Otieno PA, Mbori-Ngacha DA, Wariua G, Obimbo EM, Bosire RK, Farquhar C, Wamalwa D, John-Stewart GC
    Morbidity among HIV-1-infected mothers in Kenya: prevalence and correlates of illness during 2-year postpartum follow-up.
    Journal of acquired immune deficiency syndromes (1999) , 2007 Oct. 1 : 208-15
  • Ernst RK, Moskowitz SM, Emerson JC, Kraig GM, Adams KN, Harvey MD, Ramsey B, Speert DP, Burns JL, Miller SI
    Unique lipid a modifications in Pseudomonas aeruginosa isolated from the airways of patients with cystic fibrosis.
    The Journal of infectious diseases , 2007 Oct. : 196(7)1088-92
  • Ernst RK, Moskowitz SM, Emerson JC, Kraig GM, Adams KN, Harvey MD, Ramsey B, Speert DP, Burns JL, Miller SI
    Unique lipid a modifications in Pseudomonas aeruginosa isolated from the airways of patients with cystic fibrosis.
    The Journal of infectious diseases , 2007 Oct. : 196(7)1088-92
  • Scott-Browne JP, Shafiani S, Tucker-Heard G, Ishida-Tsubota K, Fontenot JD, Rudensky AY, Bevan MJ, Urdahl KB
    Expansion and function of Foxp3-expressing T regulatory cells during tuberculosis.
    The Journal of experimental medicine , 2007 Sept. 3 : 2159-69
  • Peck AJ, Englund JA, Kuypers J, Guthrie KA, Corey L, Morrow R, Hackman RC, Cent A, Boeckh M
    Respiratory virus infection among hematopoietic cell transplant recipients: evidence for asymptomatic parainfluenza virus infection.
    Blood , 2007 Sept. 1 : 1681-8
  • Jaspan HB, Hanekom WA
    Immunology of infants through adolescents: responses to emulate for HIV vaccines.
    Current opinion in HIV and AIDS , 2007 Sept. : 2(5)391-8
  • Heugel J, Martin ET, Kuypers J, Englund JA
    Coronavirus-associated pneumonia in previously healthy children.
    The Pediatric infectious disease journal , 2007 Aug. : 753-5
  • Bull ME, Learn GH, Mullins JI, Frenkel LM
    Methods used to examine compartmentalization of viral populations between the genital tract and peripheral blood.
    The Journal of infectious diseases , 2007 Aug. : 493-4; author reply 494-5
  • Gantt S, Shetty AK, Seidel KD, Matasa K, Musingwini G, Woelk G, Zijenah LS, Katzenstein DA, Frenkel LM
    Laboratory indicators of mastitis are not associated with elevated HIV-1 DNA loads or predictive of HIV-1 RNA loads in breast milk.
    The Journal of infectious diseases , 2007 Aug. : 570-6
  • Bull ME, Learn GH, Mullins JI, Frenkel LM
    Methods used to examine compartmentalization of viral populations between the genital tract and peripheral blood.
    The Journal of infectious diseases , 2007 Aug. : 196(3)493-4; author reply 494-5
  • Vu D, Peck AJ, Nichols WG, Varley C, Englund JA, Corey L, Boeckh M
    Safety and tolerability of oseltamivir prophylaxis in hematopoietic stem cell transplant recipients: a retrospective case-control study.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2007 July 15 : 187-93
  • Weissman SJ, Beskhlebnaya V, Chesnokova V, Chattopadhyay S, Stamm WE, Hooton TM, Sokurenko EV
    Differential stability and trade-off effects of pathoadaptive mutations in the Escherichia coli FimH adhesin.
    Infection and immunity , 2007 July : 3548-55
  • Gibson RL, Emerson J, Mayer-Hamblett N, Burns JL, McNamara S, Accurso FJ, Konstan MW, Chatfield BA, Retsch-Bogart G, Waltz DA, Acton J, Zeitlin P, Hiatt P, Moss R, Williams J, Ramsey BW
    Duration of treatment effect after tobramycin solution for inhalation in young children with cystic fibrosis.
    Pediatric pulmonology , 2007 July : 42(7)610-23
  • Gibson RL, Emerson J, Mayer-Hamblett N, Burns JL, McNamara S, Accurso FJ, Konstan MW, Chatfield BA, Retsch-Bogart G, Waltz DA, Acton J, Zeitlin P, Hiatt P, Moss R, Williams J, Ramsey BW
    Duration of treatment effect after tobramycin solution for inhalation in young children with cystic fibrosis.
    Pediatric pulmonology , 2007 July : 42(7)610-23
  • Gupta D, Lhewa D, Viswanath R, Jacob SM, Parameshwari S, Radhakrishnan R, Seidel K, Frenkel LM, Samuel NM, Melvin AJ
    Effectiveness of antenatal group HIV voluntary counseling and testing services in rural India.
    AIDS education and prevention : official publication of the International Society for AIDS Education , 2007 June : 187-97
  • Rhoads MP, Magaret AS, Zerr DM
    Family saliva sharing behaviors and age of human herpesvirus-6B infection.
    The Journal of infection , 2007 June : 54(6)623-6
  • Rhoads MP, Magaret AS, Zerr DM
    Family saliva sharing behaviors and age of human herpesvirus-6B infection.
    The Journal of infection , 2007 June : 623-6
  • Kronman MP, Baden HP, Jeffries HE, Heath J, Cohen GA, Zerr DM
    An investigation of Aspergillus cardiac surgical site infections in 3 pediatric patients.
    American journal of infection control , 2007 June : 332-7
  • Gupta D, Lhewa D, Viswanath R, Jacob SM, Parameshwari S, Radhakrishnan R, Seidel K, Frenkel LM, Samuel NM, Melvin AJ
    Effectiveness of antenatal group HIV voluntary counseling and testing services in rural India.
    AIDS education and prevention : official publication of the International Society for AIDS Education , 2007 June : 187-97
  • Rantanen MK, Lehtiö L, Rajagopal L, Rubens CE, Goldman A
    Structure of Streptococcus agalactiae serine/threonine phosphatase. The subdomain conformation is coupled to the binding of a third metal ion.
    The FEBS journal , 2007 June : 274(12)3128-37
  • Rantanen MK, Lehtiö L, Rajagopal L, Rubens CE, Goldman A
    Structure of the Streptococcus agalactiae family II inorganic pyrophosphatase at 2.80 A resolution.
    Acta crystallographica. Section D, Biological crystallography , 2007 June : 63(Pt 6)738-43
  • Nguyen D, Emond MJ, Mayer-Hamblett N, Saiman L, Marshall BC, Burns JL
    Clinical response to azithromycin in cystic fibrosis correlates with in vitro effects on Pseudomonas aeruginosa phenotypes.
    Pediatric pulmonology , 2007 June : 42(6)533-41
  • Cheung KJ Jr, Li G, Urban TA, Goldberg JB, Griffith A, Lu F, Burns JL
    Pilus-mediated epithelial cell death in response to infection with Burkholderia cenocepacia.
    Microbes and infection / Institut Pasteur , 2007 June : 9(7)829-37
  • Nguyen D, Emond MJ, Mayer-Hamblett N, Saiman L, Marshall BC, Burns JL
    Clinical response to azithromycin in cystic fibrosis correlates with in vitro effects on Pseudomonas aeruginosa phenotypes.
    Pediatric pulmonology , 2007 June : 42(6)533-41
  • Cheung KJ Jr, Li G, Urban TA, Goldberg JB, Griffith A, Lu F, Burns JL
    Pilus-mediated epithelial cell death in response to infection with Burkholderia cenocepacia.
    Microbes and infection / Institut Pasteur , 2007 June : 9(7)829-37
  • Kronman MP, Baden HP, Jeffries HE, Heath J, Cohen GA, Zerr DM
    An investigation of Aspergillus cardiac surgical site infections in 3 pediatric patients.
    American journal of infection control , 2007 June : 35(5)332-7
  • Hull JR, Shannon JJ, Tamura GS, Castner DG
    Atomic force microscopy and surface plasmon resonance investigation of fibronectin interactions with group B streptococci.
    Biointerphases , 2007 June : 64-72
  • Baggett HC, Duchin JS, Shelton W, Zerr DM, Heath J, Ortega-Sanchez IR, Tiwari T
    Two nosocomial pertussis outbreaks and their associated costs - King County, Washington, 2004.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2007 May : 537-43
  • Goldin AB, Sawin RS, Garrison MM, Zerr DM, Christakis DA
    Aminoglycoside-based triple-antibiotic therapy versus monotherapy for children with ruptured appendicitis.
    Pediatrics , 2007 May : 905-11
  • Galanakis E, Englund JA, Abe P, Qin X
    Antimicrobial susceptibility of Bordetella pertussis isolates in the state of Washington.
    International journal of antimicrobial agents , 2007 May : 609-11
  • Kim YJ, Boeckh M, Englund JA
    Community respiratory virus infections in immunocompromised patients: hematopoietic stem cell and solid organ transplant recipients, and individuals with human immunodeficiency virus infection.
    Seminars in respiratory and critical care medicine , 2007 Apr, : 222-42
  • D'Argenio DA, Wu M, Hoffman LR, Kulasekara HD, Déziel E, Smith EE, Nguyen H, Ernst RK, Larson Freeman TJ, Spencer DH, Brittnacher M, Hayden HS, Selgrade S, Klausen M, Goodlett DR, Burns JL, Ramsey BW, Miller SI
    Growth phenotypes of Pseudomonas aeruginosa lasR mutants adapted to the airways of cystic fibrosis patients.
    Molecular microbiology , 2007 Apr, : 64(2)512-33
  • Mayer-Hamblett N, Aitken ML, Accurso FJ, Kronmal RA, Konstan MW, Burns JL, Sagel SD, Ramsey BW
    Association between pulmonary function and sputum biomarkers in cystic fibrosis.
    American journal of respiratory and critical care medicine , 2007 Apr, : 175(8)822-8
  • D'Argenio DA, Wu M, Hoffman LR, Kulasekara HD, Déziel E, Smith EE, Nguyen H, Ernst RK, Larson Freeman TJ, Spencer DH, Brittnacher M, Hayden HS, Selgrade S, Klausen M, Goodlett DR, Burns JL, Ramsey BW, Miller SI
    Growth phenotypes of Pseudomonas aeruginosa lasR mutants adapted to the airways of cystic fibrosis patients.
    Molecular microbiology , 2007 Apr, : 64(2)512-33
  • Bull M, Lee D, Stucky J, Chiu YL, Rubin A, Horton H, McElrath MJ
    Defining blood processing parameters for optimal detection of cryopreserved antigen-specific responses for HIV vaccine trials.
    Journal of immunological methods , 2007 Apr, : 322(1-2)57-69
  • Jaspan HB, Flisher AJ, Myer L, Mathews C, Seebregts C, Berwick JR, Wood R, Bekker LG
    Brief report: methods for collecting sexual behaviour information from South African adolescents--a comparison of paper versus personal digital assistant questionnaires.
    Journal of adolescence , 2007 Apr, : 30(2)353-9
  • Smith S, Hanson JL, Tewksbury LR, Christy C, Talib NJ, Harris MA, Beck GL, Wolf FM
    Teaching patient communication skills to medical students: a review of randomized controlled trials.
    Evaluation & the health professions , 2007 Mar. : 3-21
  • Chattopadhyay S, Feldgarden M, Weissman SJ, Dykhuizen DE, van Belle G, Sokurenko EV
    Haplotype diversity in "source-sink" dynamics of Escherichia coli urovirulence.
    Journal of molecular evolution , 2007 Feb. : 204-14
  • Qin X, Galanakis E, Martin ET, Englund JA
    Multitarget PCR for diagnosis of pertussis and its clinical implications.
    Journal of clinical microbiology , 2007 Feb. : 506-11
  • Anderson SW, Stapp JR, Burns JL, Qin X
    Characterization of small-colony-variant Stenotrophomonas maltophilia isolated from the sputum specimens of five patients with cystic fibrosis.
    Journal of clinical microbiology , 2007 Feb. : 45(2)529-35
  • Boeckh M, Englund J, Li Y, Miller C, Cross A, Fernandez H, Kuypers J, Kim H, Gnann J, Whitley R, NIAID Collaborative Antiviral Study Group
    Randomized controlled multicenter trial of aerosolized ribavirin for respiratory syncytial virus upper respiratory tract infection in hematopoietic cell transplant recipients.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2007 Jan. 15 : 44(2)245-9
  • Li ST, Smith S, Gigante J
    A national survey of pediatric clerkship directors' approaches to meeting the LCME ED-2 requirement for quantified patient criteria for medical students.
    Teaching and learning in medicine , 2007 : 352-6
  • Kuypers J, Martin ET, Heugel J, Wright N, Morrow R, Englund JA
    Clinical disease in children associated with newly described coronavirus subtypes.
    Pediatrics , 2007 Jan. : 119(1)e70-6
  • Kuypers J, Martin ET, Heugel J, Wright N, Morrow R, Englund JA
    Clinical disease in children associated with newly described coronavirus subtypes.
    Pediatrics , 2007 Jan. : e70-6
  • Wagner T, Burns JL
    Anti-inflammatory properties of macrolides.
    The Pediatric infectious disease journal , 2007 Jan. : 26(1)75-6
  • Wagner T, Burns JL
    Anti-inflammatory properties of macrolides.
    The Pediatric infectious disease journal , 2007 : : 75-6
  • Goss CH, Burns JL
    Exacerbations in cystic fibrosis. 1: Epidemiology and pathogenesis.
    Thorax , 2007 : : 360-7
  • Hernandez RE, Putzke AP, Myers JP, Margaretha L, Moens CB
    Cyp26 enzymes generate the retinoic acid response pattern necessary for hindbrain development.
    Development (Cambridge, England) , 2007 Jan. : 134(1)177-87
  • King JC Jr, Stoddard JJ, Gaglani MJ, Moore KA, Magder L, McClure E, Rubin JD, Englund JA, Neuzil K
    Effectiveness of school-based influenza vaccination.
    The New England journal of medicine , 2006 Dec. 14 : 2523-32
  • Human herpesvirus 6 and central nervous system disease in hematopoietic cell transplantation.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2006 Dec. : 37 Suppl 1S52-6
  • Human herpesvirus 6 and central nervous system disease in hematopoietic cell transplantation.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2006 Dec. : S52-6
  • Neuzil KM, Englund JA
    Influenza vaccine for young children: two doses are better than one.
    The Journal of pediatrics , 2006 Dec. : 737-8
  • Bruce AG, Bakke AM, Bielefeldt-Ohmann H, Ryan JT, Thouless ME, Tsai CC, Rose TM
    High levels of retroperitoneal fibromatosis (RF)-associated herpesvirus in RF lesions in macaques are associated with ORF73 LANA expression in spindleoid tumour cells.
    The Journal of general virology , 2006 Dec. : 3529-38
  • Rajagopal L, Vo A, Silvestroni A, Rubens CE
    Regulation of cytotoxin expression by converging eukaryotic-type and two-component signalling mechanisms in Streptococcus agalactiae.
    Molecular microbiology , 2006 Nov. : 62(4)941-57
  • Jaspan HB, Berwick JR, Myer L, Mathews C, Flisher AJ, Wood R, Bekker LG
    Adolescent HIV prevalence, sexual risk, and willingness to participate in HIV vaccine trials.
    The Journal of adolescent health : official publication of the Society for Adolescent Medicine , 2006 Nov. : 39(5)642-8
  • Whipple ME, Barlow CB, Smith S, Goldstein EA
    Early introduction of clinical skills improves medical student comfort at the start of third-year clerkships.
    Academic medicine : journal of the Association of American Medical Colleges , 2006 Oct. : S40-3
  • Zerr DM, Frenkel LM, Huang ML, Rhoads M, Nguy L, Del Beccaro MA, Corey L
    Polymerase chain reaction diagnosis of primary human herpesvirus-6 infection in the acute care setting.
    The Journal of pediatrics , 2006 Oct. : 480-5
  • Zerr DM, Frenkel LM, Huang ML, Rhoads M, Nguy L, Del Beccaro MA, Corey L
    Polymerase chain reaction diagnosis of primary human herpesvirus-6 infection in the acute care setting.
    The Journal of pediatrics , 2006 Oct. : 480-5
  • Burnside KL, Ryan JT, Bielefeldt-Ohmann H, Gregory Bruce A, Thouless ME, Tsai CC, Rose TM
    RFHVMn ORF73 is structurally related to the KSHV ORF73 latency-associated nuclear antigen (LANA) and is expressed in retroperitoneal fibromatosis (RF) tumor cells.
    Virology , 2006 Oct. : 103-15
  • Tamura GS, Hull JR, Oberg MD, Castner DG
    High-affinity interaction between fibronectin and the group B streptococcal C5a peptidase is unaffected by a naturally occurring four-amino-acid deletion that eliminates peptidase activity.
    Infection and immunity , 2006 Oct. : 5739-46
  • Walter EB, Neuzil KM, Zhu Y, Fairchok MP, Gagliano ME, Monto AS, Englund JA
    Influenza vaccine immunogenicity in 6- to 23-month-old children: are identical antigens necessary for priming?
    Pediatrics , 2006 Sept. : e570-8
  • Englund JA, Walter EB, Gbadebo A, Monto AS, Zhu Y, Neuzil KM
    Immunization with trivalent inactivated influenza vaccine in partially immunized toddlers.
    Pediatrics , 2006 Sept. : e579-85
  • Frenkel LM, McKernan J, Dinh PV, Goldman D, Hitti J, Watts DH, Cooper ER, Dragavon J, Coombs RW
    HIV type 1 zidovudine (ZDV) resistance in blood and uterine cervical secretions of pregnant women.
    AIDS research and human retroviruses , 2006 Sept. : 870-3
  • Rantanen MK, Lehtiö L, Rajagopal L, Rubens CE, Goldman A
    Crystallization and preliminary crystallographic analysis of two Streptococcus agalactiae proteins: the family II inorganic pyrophosphatase and the serine/threonine phosphatase.
    Acta crystallographica. Section F, Structural biology and crystallization communications , 2006 Sept. : 62(Pt 9)891-4
  • Halvas EK, Aldrovandi GM, Balfe P, Beck IA, Boltz VF, Coffin JM, Frenkel LM, Hazelwood JD, Johnson VA, Kearney M, Kovacs A, Kuritzkes DR, Metzner KJ, Nissley DV, Nowicki M, Palmer S, Ziermann R, Zhao RY, Jennings CL, Bremer J, Brambilla D, Mellors JW
    Blinded, multicenter comparison of methods to detect a drug-resistant mutant of human immunodeficiency virus type 1 at low frequency.
    Journal of clinical microbiology , 2006 July : 2612-4
  • Gibson RL, Retsch-Bogart GZ, Oermann C, Milla C, Pilewski J, Daines C, Ahrens R, Leon K, Cohen M, McNamara S, Callahan TL, Markus R, Burns JL
    Microbiology, safety, and pharmacokinetics of aztreonam lysinate for inhalation in patients with cystic fibrosis.
    Pediatric pulmonology , 2006 July : 41(7)656-65
  • Johnson JR, Owens KL, Clabots CR, Weissman SJ, Cannon SB
    Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis.
    Microbes and infection / Institut Pasteur , 2006 June : 1702-13
  • Human herpesvirus 6: a clinical update.
    Herpes : the journal of the IHMF , 2006 May : 20-4
  • Smith EE, Buckley DG, Wu Z, Saenphimmachak C, Hoffman LR, D'Argenio DA, Miller SI, Ramsey BW, Speert DP, Moskowitz SM, Burns JL, Kaul R, Olson MV
    Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients.
    Proceedings of the National Academy of Sciences of the United States of America , 2006 May : 103(22)8487-92
  • Englund JA, Boeckh M, Kuypers J, Nichols WG, Hackman RC, Morrow RA, Fredricks DN, Corey L
    Brief communication: fatal human metapneumovirus infection in stem-cell transplant recipients.
    Annals of internal medicine , 2006 Mar. 7 : 144(5)344-9
  • Englund JA, Boeckh M, Kuypers J, Nichols WG, Hackman RC, Morrow RA, Fredricks DN, Corey L
    Brief communication: fatal human metapneumovirus infection in stem-cell transplant recipients.
    Annals of internal medicine , 2006 Mar. 7 : 344-9
  • Holte SE, Melvin AJ, Mullins JI, Tobin NH, Frenkel LM
    Density-dependent decay in HIV-1 dynamics.
    Journal of acquired immune deficiency syndromes (1999) , 2006 Mar. : 266-76
  • Holte SE, Melvin AJ, Mullins JI, Tobin NH, Frenkel LM
    Density-dependent decay in HIV-1 dynamics.
    Journal of acquired immune deficiency syndromes (1999) , 2006 Mar. : 266-76
  • Philipp-Staheli J, Marquardt T, Thouless ME, Bruce AG, Grant RF, Tsai CC, Rose TM
    Genetic variability of the envelope gene of Type D simian retrovirus-2 (SRV-2) subtypes associated with SAIDS-related retroperitoneal fibromatosis in different macaque species.
    Virology journal , 2006 Mar. : 11
  • Jaspan HB, Lawn SD, Safrit JT, Bekker LG
    The maturing immune system: implications for development and testing HIV-1 vaccines for children and adolescents.
    AIDS (London, England) , 2006 Feb. 28 : 20(4)483-94
  • Weissman SJ, Chattopadhyay S, Aprikian P, Obata-Yasuoka M, Yarova-Yarovaya Y, Stapleton A, Ba-Thein W, Dykhuizen D, Johnson JR, Sokurenko EV
    Clonal analysis reveals high rate of structural mutations in fimbrial adhesins of extraintestinal pathogenic Escherichia coli.
    Molecular microbiology , 2006 Feb. : 975-88
  • Gerber SI, Jones RC, Scott MV, Price JS, Dworkin MS, Filippell MB, Rearick T, Pur SL, McAuley JB, Lavin MA, Welbel SF, Garcia-Houchins S, Bova JL, Weber SG, Arnow PM, Englund JA, Gavin PJ, Fisher AG, Thomson RB, Vescio T, Chou T, Johnson DC, Fry MB, Molloy AH, Bardowski L, Noskin GA
    Management of outbreaks of methicillin-resistant Staphylococcus aureus infection in the neonatal intensive care unit: a consensus statement.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2006 Feb. : 139-45
  • Yoon SS, Coakley R, Lau GW, Lymar SV, Gaston B, Karabulut AC, Hennigan RF, Hwang SH, Buettner G, Schurr MJ, Mortensen JE, Burns JL, Speert D, Boucher RC, Hassett DJ
    Anaerobic killing of mucoid Pseudomonas aeruginosa by acidified nitrite derivatives under cystic fibrosis airway conditions.
    The Journal of clinical investigation , 2006 Feb. : 116(2)436-46
  • Chen Y, Vasil AI, Rehaume L, Mant CT, Burns JL, Vasil ML, Hancock RE, Hodges RS
    Comparison of biophysical and biologic properties of alpha-helical enantiomeric antimicrobial peptides.
    Chemical biology and drug design , 2006 Feb. : 67(2)162-73
  • Clinical Significance of HIV-1 Drug Resistance Mutations
    J. of Lab. Medicine , 2006 : 37: 554-561
  • Johnson DC, McFarland EJ, Muresan P, Fenton T, McNamara J, Read JS, Hawkins E, Bouquin PL, Estep SG, Tomaras GD, Vincent CA, Rathore M, Melvin AJ, Gurunathan S, Lambert J
    Safety and immunogenicity of an HIV-1 recombinant canarypox vaccine in newborns and infants of HIV-1-infected women.
    The Journal of infectious diseases , 2005 Dec. 15 : 2129-33
  • Boeckh M, Erard V, Zerr D, Englund J
    Emerging viral infections after hematopoietic cell transplantation.
    Pediatric transplantation , 2005 Dec. : 9 Suppl 748-54
  • Burton M, Rose TM, Faergeman NJ, Knudsen J
    Evolution of the acyl-CoA binding protein (ACBP).
    The Biochemical journal , 2005 Dec. : 299-307
  • Bekker LG, Jaspan H, McIntyre J, Wood R, Gray G
    Adolescents and HIV vaccine trials: what are the clinical trial site issues?
    Journal of the International Association of Physicians in AIDS Care (Chicago, Ill. : 2002) , 2005 Dec. : 4(4)93-7
  • Moskowitz SM, Foster JM, Emerson JC, Gibson RL, Burns JL
    Use of Pseudomonas biofilm susceptibilities to assign simulated antibiotic regimens for cystic fibrosis airway infection.
    The Journal of antimicrobial chemotherapy , 2005 Nov. : 56(5)879-86
  • Fall LH, Berman NB, Smith S, White CB, Woodhead JC, Olson AL
    Multi-institutional development and utilization of a computer-assisted learning program for the pediatrics clerkship: the CLIPP Project.
    Academic medicine : journal of the Association of American Medical Colleges , 2005 Sept. : 847-55
  • Jaspan HB, Gray GE, Robinson AK, Coovadia HM, Bekker LG
    Scientific justification for the participation of children and adolescents in HIV-1 vaccine trials in South Africa.
    South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde , 2005 Sept. : 95(9)685-7
  • Tobin NH, Learn GH, Holte SE, Wang Y, Melvin AJ, McKernan JL, Pawluk DM, Mohan KM, Lewis PF, Mullins JI, Frenkel LM
    Evidence that low-level viremias during effective highly active antiretroviral therapy result from two processes: expression of archival virus and replication of virus.
    Journal of virology , 2005 Aug. : 9625-34
  • Huang DD, Bremer JW, Brambilla DJ, Palumbo PE, Aldrovandi G, Eshleman S, Brown C, Fiscus S, Frenkel L, Hamdan H, Hart S, Kovacs A, Krogstad P, LaRussa P, Sullivan J, Weinberg A, Zhao YQ, Pediatric ACTG Sequencing Working Group
    Model for assessment of proficiency of human immunodeficiency virus type 1 sequencing-based genotypic antiretroviral assays.
    Journal of clinical microbiology , 2005 Aug. : 3963-70
  • Tobin NH, Learn GH, Holte SE, Wang Y, Melvin AJ, McKernan JL, Pawluk DM, Mohan KM, Lewis PF, Mullins JI, Frenkel LM
    Evidence that low-level viremias during effective highly active antiretroviral therapy result from two processes: expression of archival virus and replication of virus.
    Journal of virology , 2005 Aug. : 9625-34
  • Li CC, Seidel KD, Coombs RW, Frenkel LM
    Detection and quantification of human immunodeficiency virus type 1 p24 antigen in dried whole blood and plasma on filter paper stored under various conditions.
    Journal of clinical microbiology , 2005 Aug. : 3901-5
  • Wagner T, Soong G, Sokol S, Saiman L, Prince A
    Effects of azithromycin on clinical isolates of Pseudomonas aeruginosa from cystic fibrosis patients.
    Chest , 2005 Aug. : 128(2)912-9
  • Kovacs A, Montepiedra G, Carey V, Pahwa S, Weinberg A, Frenkel L, Capparelli E, Mofenson L, Smith E, McIntosh K, Burchett SK, Pediatric AIDS Clinical Trials Group 366 Study Team
    Immune reconstitution after receipt of highly active antiretroviral therapy in children with advanced or progressive HIV disease and complete or partial viral load response.
    The Journal of infectious diseases , 2005 July : 296-302
  • Zerr DM, Blume HK, Berg AT, Del Beccaro MA, Gospe SM Jr, Allpress AL, Christakis DA
    Nonfebrile illness seizures: a unique seizure category?
    Epilepsia , 2005 June : 952-5
  • Rajagopal L, Vo A, Silvestroni A, Rubens CE
    Regulation of purine biosynthesis by a eukaryotic-type kinase in Streptococcus agalactiae.
    Molecular microbiology , 2005 June : 56(5)1329-46
  • Barcy S, Huang ML, Corey L, Koelle DM
    Longitudinal analysis of herpes simplex virus-specific CD4+ cell clonotypes in infected tissues and blood.
    The Journal of infectious diseases , 2005 June : 191(12)2012-21
  • Goldstein EA, Maclaren CF, Smith S, Mengert TJ, Maestas RR, Foy HM, Wenrich MD, Ramsey PG
    Promoting fundamental clinical skills: a competency-based college approach at the University of Washington.
    Academic medicine : journal of the Association of American Medical Colleges , 2005 May : 423-33
  • Alcohol hand rub: a simple solution in search of champions.
    Archives of pediatrics & adolescent medicine , 2005 May : 502-3
  • Zerr DM, Allpress AL, Heath J, Bornemann R, Bennett E
    Decreasing hospital-associated rotavirus infection: a multidisciplinary hand hygiene campaign in a children's hospital.
    The Pediatric infectious disease journal , 2005 May : 397-403
  • Van Rie A, Wendelboe AM, Englund JA
    Role of maternal pertussis antibodies in infants.
    The Pediatric infectious disease journal , 2005 May : 24(5 Suppl)S62-5
  • Wendelboe AM, Van Rie A, Salmaso S, Englund JA
    Duration of immunity against pertussis after natural infection or vaccination.
    The Pediatric infectious disease journal , 2005 May : S58-61
  • Van Rie A, Wendelboe AM, Englund JA
    Role of maternal pertussis antibodies in infants.
    The Pediatric infectious disease journal , 2005 May : S62-5
  • Tan T, Halperin S, Cherry JD, Edwards K, Englund JA, Glezen P, Greenberg D, Rothstein E, Skowronski D
    Pertussis immunization in the global pertussis initiative North American region: recommended strategies and implementation considerations.
    The Pediatric infectious disease journal , 2005 May : S83-6
  • Zerr DM, Garrison MM, Allpress AL, Heath J, Christakis DA
    Infection control policies and hospital-associated infections among surgical patients: variability and associations in a multicenter pediatric setting.
    Pediatrics , 2005 Apr, : 115(4)e387-92
  • Yeung LC, Cunningham ML, Allpress AL, Gruss JS, Ellenbogen RG, Zerr DM
    Surgical site infections after pediatric intracranial surgery for craniofacial malformations: frequency and risk factors.
    Neurosurgery , 2005 Apr, : 733-9; discussion 733-9
  • Zerr DM, Garrison MM, Allpress AL, Heath J, Christakis DA
    Infection control policies and hospital-associated infections among surgical patients: variability and associations in a multicenter pediatric setting.
    Pediatrics , 2005 Apr, : e387-92
  • Christakis DA, Cowan CA, Garrison MM, Molteni R, Marcuse E, Zerr DM
    Variation in inpatient diagnostic testing and management of bronchiolitis.
    Pediatrics , 2005 Apr, : 878-84
  • Zerr DM, Corey L, Kim HW, Huang ML, Nguy L, Boeckh M
    Clinical outcomes of human herpesvirus 6 reactivation after hematopoietic stem cell transplantation.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2005 Apr, 1 : 932-40
  • Englund JA, Walter EB, Fairchok MP, Monto AS, Neuzil KM
    A comparison of 2 influenza vaccine schedules in 6- to 23-month-old children.
    Pediatrics , 2005 Apr, : 115(4)1039-47
  • Englund JA, Walter EB, Fairchok MP, Monto AS, Neuzil KM
    A comparison of 2 influenza vaccine schedules in 6- to 23-month-old children.
    Pediatrics , 2005 Apr, : 1039-47
  • Nair BM, Joachimiak LA, Chattopadhyay S, Montano I, Burns JL
    Conservation of a novel protein associated with an antibiotic efflux operon in Burkholderia cenocepacia.
    FEMS microbiology letters , 2005 Apr, : 245(2)337-44
  • Benson C, Gantt S, Zerr DM, Qin X, Abe P
    Use of 16S ribosomal DNA polymerase chain reaction to identify Haemophilus influenzae type b as the etiology of pericarditis in an infant.
    The Pediatric infectious disease journal , 2005 Mar. : 287-8
  • Challenges in the diagnosis and management of neonatal herpes simplex virus encephalitis.
    Pediatrics , 2005 Mar. : 795-7
  • CODEHOP-mediated PCR - a powerful technique for the identification and characterization of viral genomes.
    Virology journal , 2005 Mar. : 20
  • Zerr DM, Meier AS, Selke SS, Frenkel LM, Huang ML, Wald A, Rhoads MP, Nguy L, Bornemann R, Morrow RA, Corey L
    A population-based study of primary human herpesvirus 6 infection.
    The New England journal of medicine , 2005 Feb. 24 : 352(8)768-76
  • Zerr DM, Meier AS, Selke SS, Frenkel LM, Huang ML, Wald A, Rhoads MP, Nguy L, Bornemann R, Morrow RA, Corey L
    A population-based study of primary human herpesvirus 6 infection.
    The New England journal of medicine , 2005 Feb. 24 : 768-76
  • Zerr DM, Meier AS, Selke SS, Frenkel LM, Huang ML, Wald A, Rhoads MP, Nguy L, Bornemann R, Morrow RA, Corey L
    A population-based study of primary human herpesvirus 6 infection.
    The New England journal of medicine , 2005 Feb. : 768-76
  • Bruce AG, Bakke AM, Thouless ME, Rose TM
    Development of a real-time QPCR assay for the detection of RV2 lineage-specific rhadinoviruses in macaques and baboons.
    Virology journal , 2005 Jan. : 2
  • Beckmann C, Brittnacher M, Ernst R, Mayer-Hamblett N, Miller SI, Burns JL
    Use of phage display to identify potential Pseudomonas aeruginosa gene products relevant to early cystic fibrosis airway infections.
    Infection and immunity , 2005 Jan. : 73(1)444-52
  • Tamura GS, Bratt DS, Yim HH, Nittayajarn A
    Use of glnQ as a counterselectable marker for creation of allelic exchange mutations in group B streptococci.
    Applied and environmental microbiology , 2005 Jan. : 587-90
  • Wade NA, Unadkat JD, Huang S, Shapiro DE, Mathias A, Yasin S, Ciupak G, Watts DH, Delke I, Rathore M, Hitti J, Frenkel L, Samelson R, Smith ME, Mofenson L, Burchett SK
    Pharmacokinetics and safety of stavudine in HIV-infected pregnant women and their infants: Pediatric AIDS Clinical Trials Group protocol 332.
    The Journal of infectious diseases , 2004 Dec. : 2167-74
  • Randolph AG, Reder L, Englund JA
    Risk of bacterial infection in previously healthy respiratory syncytial virus-infected young children admitted to the intensive care unit.
    The Pediatric infectious disease journal , 2004 Nov. : 23(11)990-4
  • Randolph AG, Reder L, Englund JA
    Risk of bacterial infection in previously healthy respiratory syncytial virus-infected young children admitted to the intensive care unit.
    The Pediatric infectious disease journal , 2004 Nov. : 990-4
  • Jaspan HB, Robinson JE, Amedee AM, Van Dyke RB, Garry RF
    Amniotic fluid has higher relative levels of lentivirus-specific antibodies than plasma and can contain neutralizing antibodies.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2004 Nov. : 31(3)190-7
  • Melvin AJ, Alarcon J, Velasquez C, Rodriguez C, Piscoya J, Giraldo A, Dinh P, Frenkel LM
    Rapid HIV type 1 testing of women presenting in late pregnancy with unknown HIV status in Lima, Peru.
    AIDS research and human retroviruses , 2004 Oct. : 1046-52
  • Scott JD, Englund JA, Myerson D, Geballe AP
    Influenza A pneumonia presenting as progressive focal infiltrates in a stem cell transplant recipient.
    Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology , 2004 Oct. : 96-9
  • Melvin AJ, Alarcon J, Velasquez C, Rodriguez C, Piscoya J, Giraldo A, Dinh P, Frenkel LM
    Rapid HIV type 1 testing of women presenting in late pregnancy with unknown HIV status in Lima, Peru.
    AIDS research and human retroviruses , 2004 Oct. : 1046-52
  • DeVincenzo JP, Hall CB, Kimberlin DW, Sánchez PJ, Rodriguez WJ, Jantausch BA, Corey L, Kahn JS, Englund JA, Suzich JA, Palmer-Hill FJ, Branco L, Johnson S, Patel NK, Piazza FM
    Surveillance of clinical isolates of respiratory syncytial virus for palivizumab (Synagis)-resistant mutants.
    The Journal of infectious diseases , 2004 Sept. 1 : 975-8
  • Imhof A, Balajee SA, Fredricks DN, Englund JA, Marr KA
    Breakthrough fungal infections in stem cell transplant recipients receiving voriconazole.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2004 Sept. 1 : 743-6
  • Johnson LN, Han JY, Moskowitz SM, Burns JL, Qin X, Englund JA
    Pandoraea bacteremia in a cystic fibrosis patient with associated systemic illness.
    The Pediatric infectious disease journal , 2004 Sept. : 881-2
  • Johnson LN, Han JY, Moskowitz SM, Burns JL, Qin X, Englund JA
    Pandoraea bacteremia in a cystic fibrosis patient with associated systemic illness.
    The Pediatric infectious disease journal , 2004 Sept. : 23(9)881-2
  • Watson ME Jr, Burns JL, Smith AL
    Hypermutable Haemophilus influenzae with mutations in mutS are found in cystic fibrosis sputum.
    Microbiology (Reading, England) , 2004 Sept. : 150(Pt 9)2947-58
  • Urban TA, Griffith A, Torok AM, Smolkin ME, Burns JL, Goldberg JB
    Contribution of Burkholderia cenocepacia flagella to infectivity and inflammation.
    Infection and immunity , 2004 Sept. : 72(9)5126-34
  • Hernandez RE, Rikhof HA, Bachmann R, Moens CB
    vhnf1 integrates global RA patterning and local FGF signals to direct posterior hindbrain development in zebrafish.
    Development (Cambridge, England) , 2004 Sept. : 131(18)4511-20
  • Ellis GM, Mahalanabis M, Beck IA, Pepper G, Wright A, Hamilton S, Holte S, Naugler WE, Pawluk DM, Li CC, Frenkel LM
    Comparison of oligonucleotide ligation assay and consensus sequencing for detection of drug-resistant mutants of human immunodeficiency virus type 1 in peripheral blood mononuclear cells and plasma.
    Journal of clinical microbiology , 2004 Aug. : 3670-4
  • Li CC, Beck IA, Seidel KD, Frenkel LM
    Persistence of human immunodeficiency virus type 1 subtype B DNA in dried-blood samples on FTA filter paper.
    Journal of clinical microbiology , 2004 Aug. : 3847-9
  • Sherman DR, Guinn KM, Hickey MJ, Mathur SK, Zakel KL, Smith S
    Mycobacterium tuberculosis H37Rv: Delta RD1 is more virulent than M. bovis bacille Calmette-Guérin in long-term murine infection.
    The Journal of infectious diseases , 2004 July 1 : 123-6
  • Sokurenko EV, Feldgarden M, Trintchina E, Weissman SJ, Avagyan S, Chattopadhyay S, Johnson JR, Dykhuizen DE
    Selection footprint in the FimH adhesin shows pathoadaptive niche differentiation in Escherichia coli.
    Molecular biology and evolution , 2004 July : 1373-83
  • Qin X, Weissman SJ, Chesnut MF, Zhang B, Shen L
    Kirby-Bauer disc approximation to detect inducible third-generation cephalosporin resistance in Enterobacteriaceae.
    Annals of clinical microbiology and antimicrobials , 2004 July : 13
  • Hitti J, Frenkel LM, Stek AM, Nachman SA, Baker D, Gonzalez-Garcia A, Provisor A, Thorpe EM, Paul ME, Foca M, Gandia J, Huang S, Wei LJ, Stevens LM, Watts DH, McNamara J
    Maternal toxicity with continuous nevirapine in pregnancy: results from PACTG 1022.
    Journal of acquired immune deficiency syndromes (1999) , 2004 July : 772-6
  • Dybul M, Nies-Kraske E, Dewar R, Maldarelli F, Hallahan CW, Daucher M, Piscitelli SC, Ehler L, Weigand A, Palmer S, Metcalf JA, Davey RT, Rock Kress DM, Powers A, Beck I, Frenkel L, Baseler M, Coffin J, Fauci AS
    A proof-of-concept study of short-cycle intermittent antiretroviral therapy with a once-daily regimen of didanosine, lamivudine, and efavirenz for the treatment of chronic HIV infection.
    The Journal of infectious diseases , 2004 June : 1974-82
  • Moskowitz SM, Foster JM, Emerson J, Burns JL
    Clinically feasible biofilm susceptibility assay for isolates of Pseudomonas aeruginosa from patients with cystic fibrosis.
    Journal of clinical microbiology , 2004 May : 42(5)1915-22
  • Bull ME, Vahlenkamp TW, Dow JL, Collisson EW, Winslow BJ, Phadke AP, Tompkins MB, Tompkins WA
    Spontaneous T cell apoptosis in feline immunodeficiency virus (FIV)-infected cats is inhibited by IL2 and anti-B7.1 antibodies.
    Veterinary immunology and immunopathology , 2004 May : 99(1-2)25-37
  • Tsuang WM, Bailar JC, Englund JA
    Influenza-like symptoms in the college dormitory environment: a survey taken during the 1999-2000 influenza season.
    Journal of environmental health , 2004 Apr, : 39-42, 44
  • Frenkel LM, Tobin NH
    Understanding HIV-1 drug resistance.
    Therapeutic drug monitoring , 2004 Apr, : 116-21
  • Vahlenkamp TW, Bull ME, Dow JL, Collisson EW, Winslow BJ, Phadke AP, Tompkins WA, Tompkins MB
    B7+CTLA4+ T cells engage in T-T cell interactions that mediate apoptosis: a model for lentivirus-induced T cell depletion.
    Veterinary immunology and immunopathology , 2004 Apr, : 98(3-4)203-14
  • Smith S, Fryer-Edwards K, Diekema DS, Braddock CH 3rd
    Finding effective strategies for teaching ethics: a comparison trial of two interventions.
    Academic medicine : journal of the Association of American Medical Colleges , 2004 Mar. : 265-71
  • Allpress AL, Rosenthal GL, Goodrich KM, Lupinetti FM, Zerr DM
    Risk factors for surgical site infections after pediatric cardiovascular surgery.
    The Pediatric infectious disease journal , 2004 Mar. : 231-4
  • Allpress AL, Rosenthal GL, Goodrich KM, Lupinetti FM, Zerr DM
    Risk factors for surgical site infections after pediatric cardiovascular surgery.
    The Pediatric infectious disease journal , 2004 Mar. : 231-4
  • Nair BM, Cheung KJ Jr, Griffith A, Burns JL
    Salicylate induces an antibiotic efflux pump in Burkholderia cepacia complex genomovar III (B. cenocepacia).
    The Journal of clinical investigation , 2004 Feb. : 113(3)464-73
  • Guinn KM, Hickey MJ, Mathur SK, Zakel KL, Grotzke JE, Lewinsohn DM, Smith S, Sherman DR
    Individual RD1-region genes are required for export of ESAT-6/CFP-10 and for virulence of Mycobacterium tuberculosis.
    Molecular microbiology , 2004 Jan. : 359-70
  • Chantry CJ, Byrd RS, Englund JA, Baker CJ, McKinney RE Jr
    Growth, survival and viral load in symptomatic childhood human immunodeficiency virus infection.
    The Pediatric infectious disease journal , 2003 Dec. : 1033-9
  • Ernst RK, D'Argenio DA, Ichikawa JK, Bangera MG, Selgrade S, Burns JL, Hiatt P, McCoy K, Brittnacher M, Kas A, Spencer DH, Olson MV, Ramsey BW, Lory S, Miller SI
    Genome mosaicism is conserved but not unique in Pseudomonas aeruginosa isolates from the airways of young children with cystic fibrosis.
    Environmental microbiology , 2003 Dec. : 5(12)1341-9
  • Ordoñez CL, Henig NR, Mayer-Hamblett N, Accurso FJ, Burns JL, Chmiel JF, Daines CL, Gibson RL, McNamara S, Retsch-Bogart GZ, Zeitlin PL, Aitken ML
    Inflammatory and microbiologic markers in induced sputum after intravenous antibiotics in cystic fibrosis.
    American journal of respiratory and critical care medicine , 2003 Dec. : 168(12)1471-5
  • Shelver D, Rajagopal L, Harris TO, Rubens CE
    MtaR, a regulator of methionine transport, is critical for survival of group B streptococcus in vivo.
    Journal of bacteriology , 2003 Nov. : 185(22)6592-9
  • Saiman L, Marshall BC, Mayer-Hamblett N, Burns JL, Quittner AL, Cibene DA, Coquillette S, Fieberg AY, Accurso FJ, Campbell PW 3rd, Macrolide Study Group
    Azithromycin in patients with cystic fibrosis chronically infected with Pseudomonas aeruginosa: a randomized controlled trial.
    JAMA : the journal of the American Medical Association , 2003 Oct. : 290(13)1749-56
  • Bull ME, Kennedy-Stoskopf S, Levine JF, Loomis M, Gebhard DG, Tompkins WA
    Evaluation of T lymphocytes in captive african lions (Panthera leo) infected with feline immunodeficiency virus.
    American journal of veterinary research , 2003 Oct. : 64(10)1293-300
  • Qin X, Emerson J, Stapp J, Stapp L, Abe P, Burns JL
    Use of real-time PCR with multiple targets to identify Pseudomonas aeruginosa and other nonfermenting gram-negative bacilli from patients with cystic fibrosis.
    Journal of clinical microbiology , 2003 Sept. : 41(9)4312-7
  • Nickle DC, Shriner D, Mittler JE, Frenkel LM, Mullins JI
    Importance and detection of virus reservoirs and compartments of HIV infection.
    Current opinion in microbiology , 2003 Aug. : 410-6
  • Maternal immunization with inactivated influenza vaccine: rationale and experience.
    Vaccine , 2003 July 28 : 21(24)3460-4
  • Englund JA, Glezen WP
    Maternal immunization with Haemophilus influenzae type b vaccines in different populations.
    Vaccine , 2003 July 28 : 3455-9
  • Maternal immunization with inactivated influenza vaccine: rationale and experience.
    Vaccine , 2003 July 28 : 3460-4
  • Ioannidis JP, Contopoulos-Ioannidis DG, Rosenberg PS, Goedert JJ, De Rossi A, Espanol T, Frenkel L, Mayaux MJ, Newell ML, Pahwa SG, Rousseau C, Scarlatti G, Sei S, Sen L, O'Brien TR, HIV Host Genetics International Meta-Analysis Group
    Effects of CCR5-delta32 and CCR2-64I alleles on disease progression of perinatally HIV-1-infected children: an international meta-analysis.
    AIDS (London, England) , 2003 July : 1631-8
  • Rose TM, Henikoff JG, Henikoff S
    CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design.
    Nucleic acids research , 2003 July : 3763-6
  • Jaspan HB, Garry RF
    Preventing neonatal HIV: a review.
    Current HIV research , 2003 July : 1(3)321-7
  • Frenkel LM, Wang Y, Learn GH, McKernan JL, Ellis GM, Mohan KM, Holte SE, De Vange SM, Pawluk DM, Melvin AJ, Lewis PF, Heath LM, Beck IA, Mahalanabis M, Naugler WE, Tobin NH, Mullins JI
    Multiple viral genetic analyses detect low-level human immunodeficiency virus type 1 replication during effective highly active antiretroviral therapy.
    Journal of virology , 2003 May : 5721-30
  • Mongkolrattanothai K, Oram R, Redleaf M, Bova J, Englund JA
    Tuberculous otitis media with mastoiditis and central nervous system involvement.
    The Pediatric infectious disease journal , 2003 May : 453-6
  • Nickle DC, Jensen MA, Shriner D, Brodie SJ, Frenkel LM, Mittler JE, Mullins JI
    Evolutionary indicators of human immunodeficiency virus type 1 reservoirs and compartments.
    Journal of virology , 2003 May : 5540-6
  • Frenkel LM, Wang Y, Learn GH, McKernan JL, Ellis GM, Mohan KM, Holte SE, De Vange SM, Pawluk DM, Melvin AJ, Lewis PF, Heath LM, Beck IA, Mahalanabis M, Naugler WE, Tobin NH, Mullins JI
    Multiple viral genetic analyses detect low-level human immunodeficiency virus type 1 replication during effective highly active antiretroviral therapy.
    Journal of virology , 2003 May : 5721-30
  • Smith AL, Fiel SB, Mayer-Hamblett N, Ramsey B, Burns JL
    Susceptibility testing of Pseudomonas aeruginosa isolates and clinical response to parenteral antibiotic administration: lack of association in cystic fibrosis.
    Chest , 2003 May : 123(5)1495-502
  • Rajagopal L, Clancy A, Rubens CE
    A eukaryotic type serine/threonine kinase and phosphatase in Streptococcus agalactiae reversibly phosphorylate an inorganic pyrophosphatase and affect growth, cell segregation, and virulence.
    The Journal of biological chemistry , 2003 Apr, : 278(16)14429-41
  • Yu J, Briles DE, Englund JA, Hollingshead SK, Glezen WP, Nahm MH
    Immunogenic protein contaminants in pneumococcal vaccines.
    The Journal of infectious diseases , 2003 Mar. 15 : 1019-23
  • Jaspan HB, Richard Gaumer H, Garry RF
    Quantitative competitive reverse transcription polymerase chain reaction is not a useful method for quantification of CD4 and CD8 cell status during HIV infection.
    Journal of negative results in biomedicine , 2003 Mar. 12 : 22
  • Weissman SJ, Moseley SL, Dykhuizen DE, Sokurenko EV
    Enterobacterial adhesins and the case for studying SNPs in bacteria.
    Trends in microbiology , 2003 Mar. : 115-7
  • Zahariadis G, Levy MH, Burns JL
    Cepacia-like syndrome caused by Burkholderia multivorans.
    The Canadian journal of infectious diseases = Journal canadien des maladies infectieuses , 2003 Mar. : 14(2)123-5
  • Gibson RL, Emerson J, McNamara S, Burns JL, Rosenfeld M, Yunker A, Hamblett N, Accurso F, Dovey M, Hiatt P, Konstan MW, Moss R, Retsch-Bogart G, Wagener J, Waltz D, Wilmott R, Zeitlin PL, Ramsey B, Cystic Fibrosis Therapeutics Development Network Study Group
    Significant microbiological effect of inhaled tobramycin in young children with cystic fibrosis.
    American journal of respiratory and critical care medicine , 2003 Mar. : 167(6)841-9
  • Zahariadis G, Levy MH, Burns JL
    Cepacia-like syndrome caused by Burkholderia multivorans.
    The Canadian journal of infectious diseases = Journal canadien des maladies infectieuses , 2003 Mar. : 14(2)123-5
  • Urdahl KB, Liggitt D, Bevan MJ
    CD8+ T cells accumulate in the lungs of Mycobacterium tuberculosis-infected Kb-/-Db-/- mice, but provide minimal protection.
    Journal of immunology (Baltimore, Md. : 1950) , 2003 Feb. 15 : 1987-94
  • Capparelli EV, Englund JA, Connor JD, Spector SA, McKinney RE, Palumbo P, Baker CJ
    Population pharmacokinetics and pharmacodynamics of zidovudine in HIV-infected infants and children.
    Journal of clinical pharmacology , 2003 Feb. : 133-40
  • Bardeguez AD, Shapiro DE, Mofenson LM, Coombs R, Frenkel LM, Fowler MG, Huang S, Sperling RS, Cunningham B, Gandia J, Maupin R, Zorrilla CD, Jones T, O'Sullivan MJ
    Effect of cessation of zidovudine prophylaxis to reduce vertical transmission on maternal HIV disease progression and survival.
    Journal of acquired immune deficiency syndromes (1999) , 2003 Feb. : 170-81
  • Spencer DH, Kas A, Smith EE, Raymond CK, Sims EH, Hastings M, Burns JL, Kaul R, Olson MV
    Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa.
    Journal of bacteriology , 2003 Feb. : 185(4)1316-25
  • Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa
    J Bacteriol , 2003 Feb. : 1316-25
  • Jaspan HB, Gaumer HR, Garry RF
    Expression of granzyme B mRNA is altered in human immunodeficiency virus infected patients.
    Experimental and molecular pathology , 2003 Feb. : 74(1)13-6
  • Lewis KN, Liao R, Guinn KM, Hickey MJ, Smith S, Behr MA, Sherman DR
    Deletion of RD1 from Mycobacterium tuberculosis mimics bacille Calmette-Guérin attenuation.
    The Journal of infectious diseases , 2003 Jan. 1 : 117-23
  • Saiman L, Burns JL, Larone D, Chen Y, Garber E, Whittier S
    Evaluation of MicroScan Autoscan for identification of Pseudomonas aeruginosa isolates from cystic fibrosis patients.
    Journal of clinical microbiology , 2003 Jan. : 41(1)492-4
  • Saiman L, Burns JL, Larone D, Chen Y, Garber E, Whittier S
    Evaluation of MicroScan Autoscan for identification of Pseudomonas aeruginosa isolates from cystic fibrosis patients.
    Journal of clinical microbiology , 2003 Jan. : 492-4
  • Park JR, Coughlin J, Hawkins D, Friedman DL, Burns JL, Pendergrass T
    Ciprofloxacin and amoxicillin as continuation treatment of febrile neutropenia in pediatric cancer patients.
    Medical and pediatric oncology , 2003 : : 93-8
  • Tomich M, Griffith A, Herfst CA, Burns JL, Mohr CD
    Attenuated virulence of a Burkholderia cepacia type III secretion mutant in a murine model of infection.
    Infection and immunity , 2003 : : 1405-15
  • Aitken ML, Greene KE, Tonelli MR, Burns JL, Emerson JC, Goss CH, Gibson RL
    Analysis of sequential aliquots of hypertonic saline solution-induced sputum from clinically stable patients with cystic fibrosis.
    Chest , 2003 : : 792-9
  • Gibson RL, Burns JL, Ramsey BW
    Pathophysiology and management of pulmonary infections in cystic fibrosis.
    American journal of respiratory and critical care medicine , 2003 : : 918-51
  • Qin X, Abe PM, Weissman SJ, Manning SC
    Extrapulmonary Legionella micdadei infection in a previously healthy child.
    The Pediatric infectious disease journal , 2002 Dec. : 1174-6
  • Byington CL, Zerr DM, Taggart EW, Nguy L, Hillyard DR, Carroll KC, Corey L
    Human herpesvirus 6 infection in febrile infants ninety days of age and younger.
    The Pediatric infectious disease journal , 2002 Nov. : 996-9
  • Bornemann R, Zerr DM, Heath J, Koehler J, Grandjean M, Pallipamu R, Duchin J
    An outbreak of Salmonella serotype Saintpaul in a children's hospital.
    Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America , 2002 Nov. : 671-6
  • Koelle DM, Barcy S, Huang ML, Ashley RL, Corey L, Zeh J, Ashton S, Buchwald D
    Markers of viral infection in monozygotic twins discordant for chronic fatigue syndrome.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2002 Sept. : 35(5)518-25
  • Urdahl KB, Sun JC, Bevan MJ
    Positive selection of MHC class Ib-restricted CD8(+) T cells on hematopoietic cells.
    Nature immunology , 2002 Aug. : 772-9
  • Cohen NJ, Oram R, Elsen C, Englund JA
    Response to changes in antiretroviral therapy after genotyping in human immunodeficiency virus-infected children.
    The Pediatric infectious disease journal , 2002 July : 647-53
  • Tobin NH, Frenkel LM
    Human immunodeficiency virus drug susceptibility and resistance testing.
    The Pediatric infectious disease journal , 2002 July : 681-3
  • Tobin NH, Frenkel LM
    Human immunodeficiency virus drug susceptibility and resistance testing.
    The Pediatric infectious disease journal , 2002 July : 681-3
  • Goel AK, Rajagopal L, Nagesh N, Sonti RV
    Genetic locus encoding functions involved in biosynthesis and outer membrane localization of xanthomonadin in Xanthomonas oryzae pv. oryzae.
    Journal of bacteriology , 2002 July : 184(13)3539-48
  • Melvin AJ, Lewis PF, Mohan KM, Naugler WS, Frenkel LM
    Efficacy and toxicity of antiretroviral therapy using 4 or more agents: application of a strategy for antiretroviral management in human immunodeficiency virus-infected children.
    Archives of pediatrics & adolescent medicine , 2002 June : 568-73
  • Melvin AJ, Lewis PF, Mohan KM, Naugler WS, Frenkel LM
    Efficacy and toxicity of antiretroviral therapy using 4 or more agents: application of a strategy for antiretroviral management in human immunodeficiency virus-infected children.
    Archives of pediatrics & adolescent medicine , 2002 June : 568-73
  • Melvin AJ, Lewis PF, Mohan KM, Naugler WS, Frenkel LM
    Efficacy and toxicity of antiretroviral therapy using 4 or more agents: application of a strategy for antiretroviral management in human immunodeficiency virus-infected children.
    Archives of pediatrics & adolescent medicine , 2002 June : 568-73
  • Beckmann C, Waggoner JD, Harris TO, Tamura GS, Rubens CE
    Identification of novel adhesins from Group B streptococci by use of phage display reveals that C5a peptidase mediates fibronectin binding.
    Infection and immunity , 2002 June : 2869-76
  • Tamura GS, Nittayajarn A, Schoentag DL
    A glutamine transport gene, glnQ, is required for fibronectin adherence and virulence of group B streptococci.
    Infection and immunity , 2002 June : 2877-85
  • Rennels MB, Deloria MA, Pichichero ME, Englund JA, Anderson EL, Steinhoff MC, Decker MD, Edwards KM
    Lack of consistent relationship between quantity of aluminum in diphtheria-tetanus-acellular pertussis vaccines and rates of extensive swelling reactions.
    Vaccine , 2002 May 31 : S44-7
  • Smith S, Liggitt D, Jeromsky E, Tan X, Skerrett SJ, Wilson CB
    Local role for tumor necrosis factor alpha in the pulmonary inflammatory response to Mycobacterium tuberculosis infection.
    Infection and immunity , 2002 Apr, : 2082-9
  • Antiviral therapy of influenza.
    Seminars in pediatric infectious diseases , 2002 Apr, : 120-8
  • Beck IA, Mahalanabis M, Pepper G, Wright A, Hamilton S, Langston E, Frenkel LM
    Rapid and sensitive oligonucleotide ligation assay for detection of mutations in human immunodeficiency virus type 1 associated with high-level resistance to protease inhibitors.
    Journal of clinical microbiology , 2002 Apr, : 1413-9
  • Tompkins MB, Bull ME, Dow JL, Ball JM, Collisson EW, Winslow BJ, Phadke AP, Vahlenkamp TW, Tompkins WA
    Feline immunodeficiency virus infection is characterized by B7+CTLA4+ T cell apoptosis.
    The Journal of infectious diseases , 2002 Apr, : 185(8)1077-93
  • Zerr DM, Yeung LC, Obrigewitch RM, Huang ML, Frenkel LM, Corey L
    Case report: primary human herpesvirus-6 associated with an afebrile seizure in a 3-week-old infant.
    Journal of medical virology , 2002 Mar. : 66(3)384-7
  • Zerr DM, Yeung LC, Obrigewitch RM, Huang ML, Frenkel LM, Corey L
    Case report: primary human herpesvirus-6 associated with an afebrile seizure in a 3-week-old infant.
    Journal of medical virology , 2002 Mar. : 384-7
  • Zerr DM, Yeung LC, Obrigewitch RM, Huang ML, Frenkel LM, Corey L
    Case report: primary human herpesvirus-6 associated with an afebrile seizure in a 3-week-old infant.
    Journal of medical virology , 2002 Mar. : 384-7
  • Cieri MV, Mayer-Hamblett N, Griffith A, Burns JL
    Correlation between an in vitro invasion assay and a murine model of Burkholderia cepacia lung infection.
    Infection and immunity , 2002 Mar. : 70(3)1081-6
  • Cieri MV, Mayer-Hamblett N, Griffith A, Burns JL
    Correlation between an in vitro invasion assay and a murine model of Burkholderia cepacia lung infection.
    Infection and immunity , 2002 Mar. : 1081-6
  • Sabath DE, Barcy S, Koelle DM, Zeh J, Ashton S, Buchwald D
    Cellular immunity in monozygotic twins discordant for chronic fatigue syndrome.
    The Journal of infectious diseases , 2002 Mar. : 185(6)828-32
  • Zerr DM, Gupta D, Huang ML, Carter R, Corey L
    Effect of antivirals on human herpesvirus 6 replication in hematopoietic stem cell transplant recipients.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2002 Feb. 1 : 34(3)309-17
  • Zerr DM, Gupta D, Huang ML, Carter R, Corey L
    Effect of antivirals on human herpesvirus 6 replication in hematopoietic stem cell transplant recipients.
    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America , 2002 Feb. 1 : 309-17
  • Naugler WE, Yong FH, Carey VJ, Dragavon JA, Coombs RW, Frenkel LM
    T69D/N pol mutation, human immunodeficiency virus type 1 RNA levels, and syncytium-inducing phenotype are associated with CD4 cell depletion during didanosine therapy.
    The Journal of infectious diseases , 2002 Feb. : 448-55
  • Duthie MS, Wleklinski-Lee M, Smith S, Nakayama T, Taniguchi M, Kahn SJ
    During Trypanosoma cruzi infection CD1d-restricted NK T cells limit parasitemia and augment the antibody response to a glycophosphoinositol-modified surface protein.
    Infection and immunity , 2002 Jan. : 36-48
  • Van Dalfsen JM, Stapp JR, Phelps C, Stewart P, Burns JL
    Comparison of two culture methods for detection of tobramycin-resistant gram-negative organisms in the sputum of patients with cystic fibrosis.
    Journal of clinical microbiology , 2002 : 40: 26-30
  • Brown JC, Burns JL, Cummings P
    Ampicillin use in infant fever: a systematic review.
    Archives of pediatrics and adolescent medicine , 2002 Jan. : 27-32
  • Liu L, Coenye T, Burns JL, Whitby PW, Stull TL, LiPuma JJ
    Ribosomal DNA-directed PCR for identification of Achromobacter (Alcaligenes) xylosoxidans recovered from sputum samples from cystic fibrosis patients.
    Journal of clinical microbiology , 2002 : : 1210-1213
  • Emergence of new pathogens in CF: the devil we know or the devil we don't know?
    The Journal of pediatrics , 2002 : : 283-4
  • Graff GR, Burns JL
    Factors affecting the incidence of Stenotrophomonas maltophilia isolation in cystic fibrosis.
    Chest , 2002 : 121: 1754-1760
  • Watkins SL, Alexander SR, Brewer ED, Hesley TM, West DJ, Chan IS, Mendelman P, Bailey SM, Burns JL, Hogg RJ
    Response to recombinant hepatitis B vaccine in children and adolescents with chronic renal failure.
    American journal of kidney diseases : the official journal of the National Kidney Foundation , 2002 : 40: 365-372
  • Nair B, Stapp J, Stapp L, Bugni L, Van Dalfsen J, Burns JL
    Utility of gram staining for evaluation of the quality of cystic fibrosis sputum samples.
    Journal of clinical microbiology , 2002 : : 2791-2794
  • Bull ME, Gebhard DG, Tompkins WA, Kennedy-Stoskopf S
    Polymorphic expression in the CD8alpha chain surface receptor of African lions (Panthera leo).
    Veterinary immunology and immunopathology , 2002 Jan. : 84(3-4)181-9
  • Herpes simplex inhibits the capacity of lymphoblastoid B cell lines to stimulate CD4+ T cells
    J Immunol , 2001 : 166(10)6242-6249
  • Zebrafish Meis functions to stabilize Pbx proteins and regulate hindbrain patterning
    Development , 2001 : 128(21)4139-4151
  • Long term persistence of herpes simplex virus-specific CD8+ CTL in persons with frequently recurring genital herpes
    J Immunol , 2000 : 165(2)1146-1152
  • Seqhelp and Web interface: A tool for assisting molecular sequence analysis.
    https://bir2.biology.washington.edu/seqhelp/seqhelpinput.html , 1999
  • Clustal W multiple alignment interface
    https://bir2.biology.washington.edu/clustalw/clustalw_form.html , 1999
  • Invert DNA sequence
    http://bir.biology.washington.edu/Invert/invert1.html , 1999
  • Amino acid structure and letter code learning tool
    http://bir.biology.washington.edu/AminoAcidQuiz/AAQuiz.html , 1999
  • CODEHOP: Consensus-Degenerate Hybrid Oligonucleotide Primers PCR primers designed from multiple protein sequence alignments
    http://www.blocks.fhcrc.org/blocks/codehop.html , 1998
  • File Converter
    http://bir.biology.washington.edu/GPConverter/converter.html , 1998
  • Restriction site analysis
    http://bir.biology.washington.edu/Restrict/restrict.html , 1997
  • FcR cross-linking on monocytes results in impaired T cell stimulatory capacity
    Int Immunol , 1995 : 7(2)179-189
  • CD80 (B7-1) and CD86 (B7-2): potential targets for immunotherapy?
    Res Immunol , 1995 : 146(3)183-196
  • Helper effector function of human T cells stimulated by anti-CD3 mAb can be enhanced by co-stimulatory signals and is partially dependent on CD40-CD40 ligand interaction
    Eur J Immunol , 1994 : 24(3)508-517
  • US PATENT: Kinase inhibitors capable of increasing the sensitivity of bacterial pathogens to -lactam antibiotics
    PCT/US2012/050635. 8/13/2012
  • US PATENT: Bacterial mutant BX065 and a method thereof (Shikimate dehydrogenase as a target for developing novel bactericides against plant pathogens)
    Patent Number: 68,69,601. 3/22/2005.
  • Various patents created
  • PATENT: New methods and compounds for the selective modulation of antigen-specific T-cell responsiveness
    WO/1995/032734